Viridibacillus sp. JNUCC-6: JNUCC6_00440
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Entry
JNUCC6_00440 CDS
T06874
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij00020
Citrate cycle (TCA cycle)
vij00785
Lipoic acid metabolism
vij01100
Metabolic pathways
vij01110
Biosynthesis of secondary metabolites
vij01120
Microbial metabolism in diverse environments
vij01200
Carbon metabolism
vij01210
2-Oxocarboxylic acid metabolism
Module
vij_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vij_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JNUCC6_00440
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JNUCC6_00440
Enzymes [BR:
vij01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
JNUCC6_00440
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
DUF7334
DUF1643
Motif
Other DBs
NCBI-ProteinID:
QOV11303
UniProt:
A0A7M2QTH3
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Position
85895..88693
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AA seq
932 aa
AA seq
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MSNNVSPVSSPWAAFSGPNLGYVMEMYDLYLTSPEEVDPELVSLFEQYGAPVQTSEVSNV
SNVEPGNFAKVLAAVQYADAIRVYGHLGADIYPLKDHPRDTTRIEAKTYGLSDQDLIEIP
ASLLLKDIPASVNNGLDAINYLKAIYTSKVAVEIAHVVNSEERVWLQSKIESGVFNAGLS
NDERKAVLNQLTKVEGFEKFIHKTFVGQKRFSIEGLDALVVLMDEIVHRSEDKGVKNVMI
GMAHRGRLNVLTHVLHKPYDMMFADFAHVPNELFIPKDGSLEVTKGWFGDVKYHMGATYN
SKKGTTIKLAYNPSHLEVVSPVVTGQARAAQDNTSKAGAPTQDAKSALAILVHGDAAFAG
QGVVTETMNYSRTKGFNTGGSVHIIANNMIGFTTEHYDSRSTVYSSDPAKGYEIPILHVN
ADDPEAVVQVARFAVEYREQFGKDILVDLVGYRRYGHNEMDEPMITNPTMYTGVHGHDTV
RGLYGKALADQGIITAEEVATLDADTQKEMQAAYDHVKEVGDGQHVENEMPEAVKNGYDI
VETGVERERLEKMNKELLTWPQDFNVFKKLGKILSRREDAFVGKGKIDWGHAETLAFGTI
TQEGNSIRLTGQDAQRGTFAHRHLVLHDEKTGAELTPLHHISGADSSFVVYNSPLSEAAI
VGYEYGYNLENEKNLTIWEAQYGDFANMAQVMFDNFISASRSKWGQKSGLVMLLPHAAEG
QGSEHTSARLERFLQLAGENNWTVANLSSAANYFHLLRRQAKMLGTEAIRPLVLVSPKSL
LRNQIVAADVEELTTGHFETVIEHPTTGSAAKKVERILFASGKVAIDIAEKVGDGKDFDH
VHLVRVEQLYPFPSEKIAAIIKRFPNAKELAWVQEEPQNMGSWTFADPYMREVAEDKDVR
YIGRIVRSSPAEGDADSYKAEQARIIEEAVTR
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaatgtttcacctgtaagctcaccatgggcagctttttcaggtcccaacctt
ggctatgtgatggaaatgtacgatttgtatttaacatcaccagaagaagttgatccagaa
cttgtatcattattcgaacaatacggagcaccagttcaaactagtgaagtatcaaacgtt
tcaaacgttgaaccaggtaactttgcaaaagttttagctgccgttcaatatgcggatgcc
attcgtgtatatggtcacttaggagcagacatatatcctttaaaagaccatccacgtgac
actactcgaatcgaagcaaaaacttacggtttatctgatcaagatctaatcgaaatccct
gcttcgttattattaaaagacattcctgcaagcgttaacaatggattagatgctattaat
tacctaaaagcgatttacacaagtaaagttgctgtagaaattgcacacgttgttaacagt
gaagagagagtgtggcttcaatctaaaattgaaagtggcgtatttaacgcaggtctttct
aatgatgagagaaaagcagttttaaaccaattaacaaaggttgaaggatttgagaaattt
atccataaaacatttgtaggacaaaaacgtttctctatcgaaggtttagatgcattagtt
gttctaatggatgaaattgttcaccgttcagaagacaaaggtgtaaaaaatgttatgatc
ggtatggctcaccgtggtcgcttaaatgtgttaacacatgtattacacaaaccatatgat
atgatgtttgctgattttgcgcacgttccaaatgagttatttattccaaaagacggttct
ttagaagtaactaaaggctggttcggcgatgttaaatatcacatgggtgctacatataac
agcaaaaaaggtacaacaatcaaattagcgtataacccatctcacttagaagtagtgagt
ccagttgttacaggtcaagcacgcgcggctcaagataacacttctaaagcaggtgctcca
actcaagatgctaaatctgctctagcgatattagttcatggtgatgcagcgtttgctggt
caaggtgtcgtaactgaaacgatgaactactctcgtacaaaaggatttaacacaggtggt
tcagttcatattattgctaataatatgattggatttactactgagcattatgattcacgt
tcaactgtatactcttcagaccctgcaaaaggttatgaaattccaatattacatgttaat
gcggatgatcctgaagcagttgtacaagtggctcgttttgcagtagaatatcgtgaacaa
tttggtaaggatattttagtagacttagtcggttaccgccgctatggtcataatgaaatg
gacgaaccaatgattacaaacccaacaatgtacacaggtgttcatggacacgatacagta
cgtggattgtatggtaaagcacttgcagaccaaggcattataacagcagaagaagtcgca
actttagatgccgatacacaaaaagaaatgcaagcagcttatgatcatgtgaaagaagtt
ggcgatgggcaacatgttgaaaacgaaatgccagaagctgtgaagaacggttatgatatc
gtagaaactggtgttgaacgcgaacgtctagaaaaaatgaacaaagaattattaacatgg
ccacaagacttcaatgtcttcaaaaaactaggcaaaatccttagccgtcgtgaagatgca
tttgtaggtaaaggtaaaattgactggggtcatgctgaaacattagcattcggaacaatt
acacaagaaggtaattcgatccgtttaacaggtcaagatgcacaacgtggtacattcgca
caccgtcacctagtgttacatgacgaaaaaacgggtgcagaattaacacctttacaccac
atttctggtgcagattcttcatttgttgtatataacagcccattatctgaagccgcaatc
gtaggttatgaatatggctataatttagaaaacgagaaaaacttaactatctgggaagcg
caatacggtgacttcgcaaacatggctcaagtaatgtttgataacttcatttcagcatct
cgctctaaatggggtcaaaaatctggtcttgttatgttattaccgcatgctgctgaaggt
caaggttcagaacatacaagtgctcgtttagaacgtttcttacaattagctggtgaaaac
aactggacagttgcaaacctatcaagcgctgcaaactacttccatttattacgccgtcaa
gctaagatgttaggtacagaagcaattcgtccattagttcttgtatcaccaaaatcacta
ttacgtaatcaaatcgtagcagcagatgttgaggaattaacaactggtcacttcgaaaca
gttattgaacacccgacaactggttcagctgcgaaaaaagtagagcgtattctatttgct
tcaggtaaagtagctattgatatcgcagaaaaagttggagatggcaaagatttcgatcac
gtacacttagtacgcgttgaacaactgtacccattcccatctgagaaaattgctgcaatc
attaagcgtttccctaacgcaaaagaacttgcttgggtacaagaagaacctcaaaacatg
ggttcatggacatttgcagatccttatatgcgtgaagtagcagaagacaaagacgttcgt
tacatcggtcgtatcgtacgttcatctcctgctgaaggtgatgcagattcatacaaagct
gaacaagcacgtattattgaagaagctgtaactcgctaa
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