Viridibacillus arvi: JNUCC6_18925
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Entry
JNUCC6_18925 CDS
T06874
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vij
Viridibacillus arvi
Pathway
vij01501
beta-Lactam resistance
vij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNUCC6_18925
01503 Cationic antimicrobial peptide (CAMP) resistance
JNUCC6_18925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vij02000
]
JNUCC6_18925
01504 Antimicrobial resistance genes [BR:
vij01504
]
JNUCC6_18925
Transporters [BR:
vij02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JNUCC6_18925
Antimicrobial resistance genes [BR:
vij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JNUCC6_18925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF1548
PHM7_cyt
PNK3P
Motif
Other DBs
NCBI-ProteinID:
QOV10625
UniProt:
A0A7M2QRK4
LinkDB
All DBs
Position
3862347..3865415
Genome browser
AA seq
1022 aa
AA seq
DB search
MKISNFSIKRPVFTIVTMLLVIILGAVSFFKIPVTLIPELNPPIGVVVTNYSGASPTEVN
EKVTKPLESTLSTLPGIKSIQSTSQEGANFMMLEFNWSTDINKIQTDVLQRIDQTPIPSE
ANRPQFLKFDPAQFPVIQLTLQATGDKQDVRILAEKLEKDLLRTEGVASVNISGNLIEEM
RITLDKDKLVKNGLTQADIVSTIQGNNVSLPGDPIETGQGQQLTVRVLSTLSSVNDLKTL
IVKTNPLNGDEIQLQDIANVKVAEQPTATITRANEHPAVLMSVLQESGANTAEVSKNFQT
SLNTLLAQKQYEGVKADILFNQGDYVKLAIDNIGSSLIYGGIFAMLVLFVFLRGIRSPII
IAVAIPYSVIVTFVLMYFANFSLNILTLGALALGIGMLVDNAIVVIENIERHLGMGKTPK
QAASEGTKEVAIAIIASTLTTVAVFVPVIFITGLIGQIFTEFALTISFSLIASLVVALTV
VPMMAGHMLKRKPEDIEEKRSNSKRYTAFKNSVEWAIKHRFLVLAVTLFLLVLSVFGLTR
TGMEFLPSTDEGFFSISVKLKNGSALSKTEEVVQLIEDRLKKEKDVAVYVSFIGGNQQTQ
SRGNSKANEAELSIKLVSLDKRKRSVFEFVDDIQKDVQQDVGNRADVSFNMQTASGSAPN
TLTFRVSDTNHKRLNQAVEDIQKKIEAISDITEVENDLNNTVEEIQVNVKQQKASELGFV
PAQIAQTVQQMTKGVTATQILTNQEEVQSVVVNYGETYKKSIEQLKKLQLRSATGEFVEL
QDVAEVKVQEGPVSIRRTDQLPSVAFILKYKSTQTLTGAGEKVDKVIKELNLPESTSIKF
SGDRELFDESINDMLLAIVLAVILVYIVMAAQFESFKYPFVIMFTVPLMVIGVALALVLT
NTPIGVTAIIGILVLVGIVVNNGIVLVDYINQRKAAGVPSFEAIVTSARDRLRPILMTAS
TTVLGLIPLAIGLGEGTEMNQPMGIAVIGGLVSSTFLTLYIVPIVYSLFDRETRFLHKKR
KA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaagattagtaatttttccatcaagaggccagtttttacgatagtgacgatgttgctc
gtgattattctaggcgcagtatcttttttcaaaattccagtgactttaattcctgaatta
aatccgccaattggtgttgtcgttacaaattattctggagctagtccaactgaagtaaat
gaaaaggttacaaaacctttagaaagtaccttatcaaccttgccgggaattaaatcgatt
caatcgacttctcaagagggcgcaaactttatgatgctggaattcaattggtcgacagat
ataaataaaatacaaacagatgttttacagcgtatagatcaaactcctatcccatcagaa
gctaatcgtcctcaatttttaaagttcgatccggctcaatttccagttattcaactgaca
ttgcaagcaactggagacaaacaagatgtccgcattttagcagaaaaactagagaaagat
ttactacggactgaaggcgttgctagtgtaaatatttcagggaatcttatagaagaaatg
cgtataacattagataaggacaagcttgtaaaaaatggtttaacccaggcagatattgtc
tcaacaattcaaggaaacaatgtttcactacctggagatccaattgaaacgggtcaagga
cagcaactgacagtgagagtgttaagtacgttaagttcagtaaacgatttaaaaacactt
attgtaaaaacaaaccctttaaatggggatgaaatacaattacaagacattgcaaatgta
aaagtggctgagcaaccaactgcaacgattactagagcaaatgagcatccagctgtctta
atgtctgtcttacaagaatccggagctaatacagcagaagtttcaaagaatttccaaacc
tcattaaatactttgttagcccaaaagcagtatgaaggtgttaaggctgatattttattt
aatcagggggattatgtaaagttagcaattgataatattggttcatcgctcatttatggt
gggatttttgctatgttagttctatttgtttttttaagaggcattcgtagccctattatc
atagcggttgcaatcccgtattctgtcattgtgacgttcgttcttatgtatttcgccaat
ttttcgttaaatatattaacgcttggagcactagctttagggatcggtatgcttgttgat
aacgctattgtcgtaattgaaaatattgagcgccatctagggatggggaaaacaccaaag
caagcagcttctgaaggaacgaaagaagtagccatagcaattattgcatctaccttaacg
acagtagctgtgtttgtaccagttatttttataacaggattaattggtcaaattttcact
gaatttgcattgactatttcttttagtttaattgcatctttagtcgttgcacttactgtt
gtgccgatgatggccgggcatatgttgaagagaaagccagaagatattgaagaaaagcgt
agcaattccaaacggtatactgcatttaaaaattcagttgagtgggcaatcaaacataga
ttcttagtgcttgctgtaacactatttttacttgttctttcggtttttggattaacccgt
acgggcatggagtttttgccatcgactgatgaagggttcttttcaatttctgtgaaactt
aaaaatggctccgcgctttctaaaacagaagaagtggttcagttaattgaagatcgattg
aaaaaagaaaaagacgttgcagtttacgttagcttcatcggagggaatcaacaaacacaa
tcgagggggaattctaaagcaaatgaagctgaactttcgatcaaactagtatcccttgat
aaacgaaagcgctctgtatttgagttcgtagatgatatacaaaaagatgtgcaacaggac
gtagggaatagggcagatgttagttttaatatgcaaacagcatctggctctgctccgaat
acattaacatttagagtttctgacacgaatcataagcgccttaatcaggcagtggaggat
attcagaagaaaatagaggcaatttcagatattactgaagttgaaaatgacctcaataat
acagttgaagaaatacaagtaaatgtgaagcaacagaaggcctcagaattaggttttgtg
cccgcccaaattgcacaaaccgtacaacaaatgacaaaaggcgtcacagcaacgcaaatt
ttgacaaatcaagaagaagtacaatcggttgttgtgaattacggtgaaacatataaaaaa
agtatcgagcaattaaaaaagttacaactgagaagtgcaacaggtgaatttgttgaatta
caggatgtagctgaagtgaaagtgcaagaagggccagtatctatcagacgtacggaccaa
ctgccatccgttgcctttattttgaagtataagtcaacacaaacgttaactggggcagga
gaaaaagttgataaagtaattaaagagctcaatcttccagaaagtacatcgattaaattt
agtggagatcgtgaactgtttgatgaatcgattaacgatatgctgttagccattgtatta
gcagtaatacttgtttatatcgtaatggcagctcagtttgaatcttttaaatatcctttt
gtcattatgttcactgtaccattaatggttattggtgttgcacttgctttagtgttaacg
aatactccgattggggtgactgccattattggtattctggttctagttggaatagttgtt
aataatggtattgtacttgtcgattacattaatcagcgaaaggctgctggagtaccatct
tttgaagcgattgtcacttctgcaagagatcgtttaaggccaatattaatgacagcttca
acgactgttctaggattaatacctttagccattggtttaggtgaaggaacagaaatgaat
caaccaatggggattgctgtaatcggcggattagtaagttctacatttttaactctctat
attgtaccgattgtttatagtttgtttgatcgtgaaacacgttttttgcataaaaagaga
aaagcatag
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