Virgibacillus salidurans: KFZ58_00280
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Entry
KFZ58_00280 CDS
T08697
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vik
Virgibacillus salidurans
Pathway
vik03030
DNA replication
vik03430
Mismatch repair
vik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFZ58_00280 (holB)
03430 Mismatch repair
KFZ58_00280 (holB)
03440 Homologous recombination
KFZ58_00280 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vik03032
]
KFZ58_00280 (holB)
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_00280 (holB)
Enzymes [BR:
vik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFZ58_00280 (holB)
DNA replication proteins [BR:
vik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFZ58_00280 (holB)
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFZ58_00280 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
TIP49
AAA
TPR_TNPO3_IPO13_4th
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UJL46460
LinkDB
All DBs
Position
50316..51305
Genome browser
AA seq
329 aa
AA seq
DB search
MKTWSEVAEVQPLASKIVTNSIKKDRISHAYLLQGARGTGKEAIALLLAKDLFCENKTGV
EPCNMCNACKRIASGNHPDVHWMEPDGQSIKIEQIRDLQKEFTYSGLESNKKVYVIKGAD
TLTANAANRILKFLEEPSRQTTAIMLTENSQWIIPTIKSRCQVIDLKPLDPVSFQHRLIE
EGMTKGNAVLMSALTNNLDDAFAWNDNEWFATARKLVVQLVRVYTNNPEDVFLFIHNHWV
NHFKERNEQEQGLDLLLLAFKDILYYHIGNEDSMVFFAPQNEMLEKAAMTFSQEKLVTVL
NAILQAKRNLKQNVHPTLVIEQLTLHIQR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatggtctgaagttgcagaggtacagcctttggcaagtaaaatcgttacaaac
agcataaaaaaagaccgtatttctcatgcgtatttactccagggagcacgtggtacgggg
aaagaggccattgctttactacttgcaaaggatttattttgcgagaataaaacaggggtt
gaaccctgcaacatgtgtaatgcatgtaagcgaattgcttccgggaaccatccagatgtg
cattggatggagccggatgggcaatcgattaaaatagaacagattagagacttgcaaaag
gagtttacttattcaggccttgaatccaataaaaaagtgtatgtgattaaaggtgctgat
acgttaacagctaatgccgcaaaccgcattctgaagtttttggaagaaccaagcagacag
acgacggcgataatgctgactgaaaatagccagtggattataccaacgatcaaatcccgt
tgtcaggtgattgatctcaagccgctagacccagtttccttccagcatcgtttaatagaa
gaagggatgacgaagggaaatgctgttttaatgagtgcgttaacgaataatttggatgat
gcgtttgcctggaatgacaatgagtggtttgccacagcaagaaagttagtggtacaattg
gtaagagtctatacaaataatcctgaagatgtatttctgtttattcataatcattgggtg
aaccatttcaaggaaagaaatgaacaggagcaaggattggatttattacttctggcattt
aaggatattctttattaccatattggaaatgaagattccatggtttttttcgcaccgcaa
aatgaaatgctggaaaaggcagcaatgactttttcacaagagaaactggtaacggttttg
aatgcgattttgcaggcgaaaagaaacttgaagcagaatgttcatccgacattagtgatt
gaacagcttacacttcatatacagaggtga
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