Virgibacillus salidurans: KFZ58_04910
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Entry
KFZ58_04910 CDS
T08697
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vik
Virgibacillus salidurans
Pathway
vik03420
Nucleotide excision repair
vik03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KFZ58_04910 (pcrA)
03430 Mismatch repair
KFZ58_04910 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_04910 (pcrA)
Enzymes [BR:
vik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KFZ58_04910 (pcrA)
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KFZ58_04910 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KFZ58_04910 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
BREX_BrxC_helical
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
UJL47254
LinkDB
All DBs
Position
907422..909638
Genome browser
AA seq
738 aa
AA seq
DB search
MSQTMDGLLKGLNKEQREAVKHTDGPLLIMAGAGSGKTRVLTHRIAYLLGEKDVSARNVL
AITFTNKAAREMKDRVRRLVGPESEQMWVSTFHSMCVRILRRDVDRIGYSRNFTILDSGD
QLSVIKQVLKNLNIDAKKFDPRAMLGQISGAKNELITPEEYNKNVGNFFERQVAQIYEAY
QKMLQKNQSLDFDDLIMQTIHLFKRVPEVLEYYQRRFQYIHVDEYQDTNHAQYFLVKQLA
SRFQNLCVVGDSDQSIYGWRGADIANILSFEKDYPSSRAIFLEQNYRSTKSILSAANEVI
RNNPGRKPKNLWTENPDGKNIHYYQGATEQEEALFITDKIQELTGQEGYSPNDLAILYRT
NAQSRAIEDTLMKSGVAYQMVGGTKFYERKEIKDMVAYLRLITNPDDDISFERVVNVPKR
GIGKTSIEKVRAHAAAHDISFNEAVKEIDFTGVSKKAANALAEFGSLVQTLSQQQEFLTA
TDMVEAVLERTGYEEMLKNEKSLEAQSRLENLEEFKTVTQDFEKTAEDKTLVAFLTDLAL
IADLDRVDAGDNQDEPKITLMTLHAAKGLEFPIVFLIGLEEKVFPHSRSMFDEKEMEEER
RLAYVGITRAEQELYLTHARMRTLYGRTNMNPISRFINEIPEELVDGMEEEQVTFGGGFG
QPKNLTPPVKRKAEKIQKTTGAESQTWGPGDKASHNKWGVGTVVKVDGEGEGIELDIAFP
APVGIKRVLAKFAPITKQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagacgatggatggcttactaaaaggattgaataaagagcaacgagaagctgtt
aaacatacggacggccccctgcttattatggcgggagcgggaagtggaaaaacacgggtg
cttacacatcgcatcgcctacttacttggcgaaaaggatgtctcagcaagaaatgtactg
gcgattacttttacaaataaggctgcacgtgagatgaaggatcgtgtacgaagattagtt
ggtccggagagtgaacagatgtgggtttccacattccattcgatgtgtgtacgcatatta
agacgagatgttgatcgcatcggctacagtcgcaattttacgattctggatagcggtgat
cagctatcggttatcaaacaagttttaaaaaatctgaatatcgatgcgaagaaatttgac
cctcgggcaatgttaggacaaattagcggggcgaaaaacgagctgattacaccggaagaa
tacaacaaaaatgtcgggaattttttcgagagacaggttgcgcaaatttatgaagcgtac
cagaaaatgctgcagaaaaaccaatcccttgattttgacgatttgatcatgcagacgatt
catttgtttaaacgggttccggaagtgctcgaatactaccagcgccgttttcagtatatt
catgttgatgagtatcaagatacaaaccacgcacagtatttccttgtgaagcaattggca
agccgttttcaaaatctttgcgtcgtcggggattcggatcagtcgatctatggctggcgt
ggcgcggatatagcaaacatcctttcatttgaaaaagactacccatcatcacgggcaatt
ttcctggaacaaaattaccgttcgacaaaatcaattctttctgcggcaaatgaagtgatt
cgaaataaccctggacgcaaaccgaaaaatctgtggacagaaaatccagacgggaaaaac
attcattattatcagggcgctaccgagcaggaagaagcgttgtttattacagataaaatt
caggagcttaccggacaagagggttattcgccgaatgatttggcaattttataccggacg
aacgcgcaatcccgtgcgatcgaggatacattaatgaagtcgggtgttgcctatcaaatg
gttggcggcacaaagttctatgagcgaaaagaaatcaaggatatggtcgcctacctgcgt
ttaattacaaacccggatgatgacataagctttgaacgtgtcgtgaacgtacctaaacgc
ggaattggtaaaacgtctattgaaaaggttcgcgcgcatgcggctgcccatgatatttcc
ttcaatgaagctgtaaaagaaattgattttactggggtatccaagaaagctgccaatgca
ttagctgaattcggaagcctcgttcagaccttgtctcagcagcaggaatttttaacagct
acagatatggttgaggctgtgctcgagcggacaggctatgaagaaatgctgaagaatgaa
aaaagccttgaggcgcaaagccgcctcgaaaacttggaagagttcaagacggttacacag
gattttgaaaaaacagcagaagataaaacccttgttgctttcctgacagatcttgcactg
attgcagatcttgaccgtgttgatgcgggtgataatcaagatgaaccaaaaatcaccttg
atgacattgcacgctgcaaaagggttggaattcccaattgtctttttgatcggcttagag
gaaaaagtattcccacacagccgctccatgtttgatgaaaaagagatggaagaggagcgc
aggctggcttatgtaggcattacccgtgctgaacaagaactatacttaacccatgcaaga
atgcgcacactatatgggagaacgaatatgaatccaattagcaggttcattaatgaaatc
cccgaagaattagttgatggcatggaagaggaacaagttacgtttggcggtggatttgga
caaccaaaaaatctgaccccacctgtgaaacgaaaagcagaaaaaatacaaaaaacaacg
ggagcagaaagtcaaacctgggggccgggtgacaaagcaagccataataaatggggtgta
ggtactgtcgtgaaagtagatggtgaaggtgaaggaatcgaacttgatatcgcatttccg
gcgccagtaggcatcaagcgagtactggccaaatttgccccaattacgaaacaatag
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