Virgibacillus salidurans: KFZ58_06270
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Entry
KFZ58_06270 CDS
T08697
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vik
Virgibacillus salidurans
Pathway
vik03030
DNA replication
vik03430
Mismatch repair
vik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFZ58_06270
03430 Mismatch repair
KFZ58_06270
03440 Homologous recombination
KFZ58_06270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vik03032
]
KFZ58_06270
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_06270
Enzymes [BR:
vik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFZ58_06270
DNA replication proteins [BR:
vik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFZ58_06270
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFZ58_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UJL47478
LinkDB
All DBs
Position
1186835..1187446
Genome browser
AA seq
203 aa
AA seq
DB search
MNFASIDFETANEKRFSPCAIGVVVANENEILDEFYSLINPLMEFTSFNTYIHGITESDV
SDAPTFPQVWPTLYNYLSQNTVVAHNASFDMSVLRQTLDYFNLTYPNMDYLCTANISKRV
WPDLINHKLNTLASHHGIRFEHHHALEDARVAAKILMTALAAYQAGSMDFFLEKCQMTKG
RIYEHGYVPPRSKPVRRKRKLYF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgcttccatagatttcgaaacggctaatgaaaagcgtttcagtccatgtgct
attggtgtagttgtcgccaatgaaaatgagattttggatgaattttacagtttaattaat
ccgttgatggaatttacctcatttaatacatatatccatgggattacggagagtgatgtg
tctgatgcaccaacatttcctcaggtttggccgacactgtataactatttatcacaaaac
accgtcgttgcgcataatgccagctttgatatgagtgtgctcaggcagacgctggattat
tttaatttgacctatccgaatatggactacctttgtacagcaaatatttctaaacgggta
tggccagacttgatcaatcataaactaaacacactggcgtcccatcacggtattcgattt
gaacatcatcatgcactggaagacgctcgggttgcggcaaaaattttgatgacggctctc
gccgcatatcaggctggttccatggatttctttttggaaaaatgtcagatgactaaggga
agaatctatgaacatggatatgtcccaccaaggagtaaacccgttaggcgaaagcgaaag
ttatacttttag
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