Virgibacillus sp. NKC19-16: KFZ58_08115
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Entry
KFZ58_08115 CDS
T08697
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vik
Virgibacillus sp. NKC19-16
Pathway
vik00010
Glycolysis / Gluconeogenesis
vik00020
Citrate cycle (TCA cycle)
vik00260
Glycine, serine and threonine metabolism
vik00280
Valine, leucine and isoleucine degradation
vik00310
Lysine degradation
vik00380
Tryptophan metabolism
vik00620
Pyruvate metabolism
vik00630
Glyoxylate and dicarboxylate metabolism
vik00640
Propanoate metabolism
vik00670
One carbon pool by folate
vik00785
Lipoic acid metabolism
vik01100
Metabolic pathways
vik01110
Biosynthesis of secondary metabolites
vik01120
Microbial metabolism in diverse environments
vik01200
Carbon metabolism
vik01210
2-Oxocarboxylic acid metabolism
vik01240
Biosynthesis of cofactors
Module
vik_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vik_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vik_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KFZ58_08115 (lpdA)
00020 Citrate cycle (TCA cycle)
KFZ58_08115 (lpdA)
00620 Pyruvate metabolism
KFZ58_08115 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
KFZ58_08115 (lpdA)
00640 Propanoate metabolism
KFZ58_08115 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KFZ58_08115 (lpdA)
00280 Valine, leucine and isoleucine degradation
KFZ58_08115 (lpdA)
00310 Lysine degradation
KFZ58_08115 (lpdA)
00380 Tryptophan metabolism
KFZ58_08115 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KFZ58_08115 (lpdA)
00670 One carbon pool by folate
KFZ58_08115 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vik04147
]
KFZ58_08115 (lpdA)
Enzymes [BR:
vik01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
KFZ58_08115 (lpdA)
Exosome [BR:
vik04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
KFZ58_08115 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
3HCDH_N
UDPG_MGDP_dh_N
Amino_oxidase
Lys_Orn_oxgnase
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UJL47803
LinkDB
All DBs
Position
1573476..1574882
Genome browser
AA seq
468 aa
AA seq
DB search
MVVGDFPIEVDTLVVGAGPGGYVAAIRAAQLGQKVTIVDKGALGGVCLNVGCIPSKALIQ
AGHLTEQAHGNEELGISTENVSVDFSKVQEWKGSVVNKLTSGVESLLKGNKVDILKGEAY
FVDKNTAKIMDEKDSQTYKFNNCIIATGSSPIEIPSFKFSDRVLDSTGALDLKEIPKKMV
VIGGGYVGTELGSAYANFGTDITILEGADDILGGFEKQMKQVVKKRLKKKDAKVVTKAMA
KGVEESKDGVKVSYEVDGKEETIEADYVLVTVGRRPNTEEIGLEQVGIETDDNGLIKVDK
QSRTNIDNIYAIGDIVPGSPLAHKASYEGKIAAEVISGEKSEVDYIGMPAVAFTDPELAS
VGYTEKEAKDAGYKAKASKFPFAANGRALSLNDSDGFMKLVTRVEDGLVIGAQIAGPNAS
DMIAEVGLAIEAGMTAEDISLTVHAHPTLGEITMEAAEVALGTPIHSM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagactttccaattgaggtagacacgctggtcgtaggagccggtccaggc
ggttatgtagcagccattcgtgcagcacaattagggcagaaggttacaattgttgataaa
ggggcactcgggggagtttgtctaaacgttggatgtattccatcaaaagccttgattcaa
gcaggacatttaacagaacaagctcacggcaatgaagaattaggtatttcaaccgaaaat
gtttctgtagatttttctaaagttcaagagtggaaaggcagcgtagttaataaacttact
tcaggtgttgagagccttttgaaagggaataaagtggatattttaaaaggtgaggcatac
tttgttgacaaaaatacagcaaaaattatggatgaaaaagattctcagacctataaattt
aataattgtattatcgcaacaggttcatcaccaattgaaattccaagtttcaaattttct
gatcgtgtactggattctaccggcgcgcttgatttgaaagaaattcctaagaaaatggtt
gtcatcggtggcggttatgttggtacggaacttggttctgcctatgcgaactttggtaca
gacattactattttagagggtgccgatgatatacttggcggtttcgaaaaacaaatgaaa
caagttgttaaaaaacgcttgaagaaaaaagacgcaaaagttgttacgaaagcaatggct
aaaggcgttgaagaatctaaagatggtgtgaaagtcagctatgaagttgacggtaaagaa
gaaacgattgaagctgattacgtattagttacagttggtcgtcgtccaaatacagaagaa
attgggttagaacaagtaggtattgagacagacgacaacggtttaattaaagttgataaa
caaagccgtacaaatattgataacatctatgcaattggtgatatcgtaccaggctcaccg
cttgcacataaagcttcttatgaaggaaaaatagctgctgaagtaatcagtggtgaaaaa
tccgaagttgactatattggaatgcctgctgttgcgttcacagaccctgaactcgcatct
gttggttatacagaaaaagaagcgaaagatgccggttataaagcaaaagcatctaaattc
ccatttgcagcaaacggtcgtgccctgtcgctaaatgatagtgatggtttcatgaaacta
gtcacgcgcgttgaggatggattagtgattggagctcaaatcgccggaccgaatgcaagt
gatatgattgcagaagttggactagcaattgaagcaggtatgacagctgaggatatttcc
ttaaccgtacatgcacatccaacacttggtgaaatcaccatggaagctgcagaagtagct
ttaggaactccaattcatagtatgtaa
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