KEGG   Virgibacillus sp. NKC19-16: KFZ58_08115
Entry
KFZ58_08115       CDS       T08697                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vik  Virgibacillus sp. NKC19-16
Pathway
vik00010  Glycolysis / Gluconeogenesis
vik00020  Citrate cycle (TCA cycle)
vik00260  Glycine, serine and threonine metabolism
vik00280  Valine, leucine and isoleucine degradation
vik00310  Lysine degradation
vik00380  Tryptophan metabolism
vik00620  Pyruvate metabolism
vik00630  Glyoxylate and dicarboxylate metabolism
vik00640  Propanoate metabolism
vik00670  One carbon pool by folate
vik00785  Lipoic acid metabolism
vik01100  Metabolic pathways
vik01110  Biosynthesis of secondary metabolites
vik01120  Microbial metabolism in diverse environments
vik01200  Carbon metabolism
vik01210  2-Oxocarboxylic acid metabolism
vik01240  Biosynthesis of cofactors
Module
vik_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vik_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vik_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:vik00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KFZ58_08115 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KFZ58_08115 (lpdA)
   00620 Pyruvate metabolism
    KFZ58_08115 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KFZ58_08115 (lpdA)
   00640 Propanoate metabolism
    KFZ58_08115 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KFZ58_08115 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KFZ58_08115 (lpdA)
   00310 Lysine degradation
    KFZ58_08115 (lpdA)
   00380 Tryptophan metabolism
    KFZ58_08115 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KFZ58_08115 (lpdA)
   00670 One carbon pool by folate
    KFZ58_08115 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vik04147]
    KFZ58_08115 (lpdA)
Enzymes [BR:vik01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KFZ58_08115 (lpdA)
Exosome [BR:vik04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KFZ58_08115 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored HI0933_like NAD_binding_8 FAD_binding_3 AlaDh_PNT_C 3HCDH_N UDPG_MGDP_dh_N Amino_oxidase Lys_Orn_oxgnase NAD_binding_7
Other DBs
NCBI-ProteinID: UJL47803
LinkDB
Position
1573476..1574882
AA seq 468 aa
MVVGDFPIEVDTLVVGAGPGGYVAAIRAAQLGQKVTIVDKGALGGVCLNVGCIPSKALIQ
AGHLTEQAHGNEELGISTENVSVDFSKVQEWKGSVVNKLTSGVESLLKGNKVDILKGEAY
FVDKNTAKIMDEKDSQTYKFNNCIIATGSSPIEIPSFKFSDRVLDSTGALDLKEIPKKMV
VIGGGYVGTELGSAYANFGTDITILEGADDILGGFEKQMKQVVKKRLKKKDAKVVTKAMA
KGVEESKDGVKVSYEVDGKEETIEADYVLVTVGRRPNTEEIGLEQVGIETDDNGLIKVDK
QSRTNIDNIYAIGDIVPGSPLAHKASYEGKIAAEVISGEKSEVDYIGMPAVAFTDPELAS
VGYTEKEAKDAGYKAKASKFPFAANGRALSLNDSDGFMKLVTRVEDGLVIGAQIAGPNAS
DMIAEVGLAIEAGMTAEDISLTVHAHPTLGEITMEAAEVALGTPIHSM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtagtaggagactttccaattgaggtagacacgctggtcgtaggagccggtccaggc
ggttatgtagcagccattcgtgcagcacaattagggcagaaggttacaattgttgataaa
ggggcactcgggggagtttgtctaaacgttggatgtattccatcaaaagccttgattcaa
gcaggacatttaacagaacaagctcacggcaatgaagaattaggtatttcaaccgaaaat
gtttctgtagatttttctaaagttcaagagtggaaaggcagcgtagttaataaacttact
tcaggtgttgagagccttttgaaagggaataaagtggatattttaaaaggtgaggcatac
tttgttgacaaaaatacagcaaaaattatggatgaaaaagattctcagacctataaattt
aataattgtattatcgcaacaggttcatcaccaattgaaattccaagtttcaaattttct
gatcgtgtactggattctaccggcgcgcttgatttgaaagaaattcctaagaaaatggtt
gtcatcggtggcggttatgttggtacggaacttggttctgcctatgcgaactttggtaca
gacattactattttagagggtgccgatgatatacttggcggtttcgaaaaacaaatgaaa
caagttgttaaaaaacgcttgaagaaaaaagacgcaaaagttgttacgaaagcaatggct
aaaggcgttgaagaatctaaagatggtgtgaaagtcagctatgaagttgacggtaaagaa
gaaacgattgaagctgattacgtattagttacagttggtcgtcgtccaaatacagaagaa
attgggttagaacaagtaggtattgagacagacgacaacggtttaattaaagttgataaa
caaagccgtacaaatattgataacatctatgcaattggtgatatcgtaccaggctcaccg
cttgcacataaagcttcttatgaaggaaaaatagctgctgaagtaatcagtggtgaaaaa
tccgaagttgactatattggaatgcctgctgttgcgttcacagaccctgaactcgcatct
gttggttatacagaaaaagaagcgaaagatgccggttataaagcaaaagcatctaaattc
ccatttgcagcaaacggtcgtgccctgtcgctaaatgatagtgatggtttcatgaaacta
gtcacgcgcgttgaggatggattagtgattggagctcaaatcgccggaccgaatgcaagt
gatatgattgcagaagttggactagcaattgaagcaggtatgacagctgaggatatttcc
ttaaccgtacatgcacatccaacacttggtgaaatcaccatggaagctgcagaagtagct
ttaggaactccaattcatagtatgtaa

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