Virgibacillus sp. NKC19-16: KFZ58_08680
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Entry
KFZ58_08680 CDS
T08697
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vik
Virgibacillus sp. NKC19-16
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vik03019
]
KFZ58_08680
03009 Ribosome biogenesis [BR:
vik03009
]
KFZ58_08680
03036 Chromosome and associated proteins [BR:
vik03036
]
KFZ58_08680
Enzymes [BR:
vik01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KFZ58_08680
Messenger RNA biogenesis [BR:
vik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KFZ58_08680
Ribosome biogenesis [BR:
vik03009
]
Eukaryotic type
90S particles
RNase
KFZ58_08680
Prokaryotic type
rRNA processing factors
KFZ58_08680
Chromosome and associated proteins [BR:
vik03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KFZ58_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UJL47908
LinkDB
All DBs
Position
1687379..1688059
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AA seq
226 aa
AA seq
DB search
MNVTELEKQLDITFSDKNLLRQAFTHSSYVNEHRGESFSDNERLEFLGDAVLELGISQYL
YRENKNMPEGEMTKLRASIVCEPSLVNFARDLQFGDYILLGKGEEQTGGRDRPALLADVF
EAFLGALYLEHGFDKVLAFIEEHVIPKITTGAFSHAMDYKSQLQELVQQYKNQTIEYKIV
EEKGPSHDKEFVIQVIIKGDIAGSGVGRTKKEAEQRAAKAALDKFS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttacggagttagaaaaacaactcgacatcacatttagtgataagaatttgtta
aggcaagcttttacacattcatcttatgtgaatgagcatcgtggagaatcattttcggat
aatgagcgattggagtttttaggtgacgctgtattggaattaggtatttcccagtattta
tatcgagaaaataaaaatatgcctgaaggagaaatgacgaaattacgtgcatcgattgtt
tgtgagccatccctggttaattttgcacgtgatctacagtttggtgattatattttgctc
ggaaaaggggaagaacaaacaggcggacgtgatcgccccgctttactggcagatgtattt
gaagcatttctgggagcattatatttagagcatggatttgataaagttttagcttttata
gaagaacatgttattccgaaaataaccacaggtgctttttcgcatgcgatggattataaa
agtcagctgcaggaattagttcagcaatataaaaatcagaccattgaatataaaattgtt
gaagaaaaaggtccctcccatgataaggagttcgttattcaagtaatcattaaaggtgac
attgccggatccggtgtagggcgaactaaaaaagaagcagaacaacgcgcagcaaaggca
gcgcttgataaattttcatga
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