Virgibacillus salidurans: KFZ58_09045
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Entry
KFZ58_09045 CDS
T08697
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vik
Virgibacillus salidurans
Pathway
vik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFZ58_09045 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vik03019
]
KFZ58_09045 (pnp)
03016 Transfer RNA biogenesis [BR:
vik03016
]
KFZ58_09045 (pnp)
Enzymes [BR:
vik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KFZ58_09045 (pnp)
Messenger RNA biogenesis [BR:
vik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KFZ58_09045 (pnp)
Transfer RNA biogenesis [BR:
vik03016
]
Prokaryotic type
tRNA degradation factors
KFZ58_09045 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UJL47973
LinkDB
All DBs
Position
1753854..1755965
Genome browser
AA seq
703 aa
AA seq
DB search
MSEEKQVFSTEIAGKPFTVEIGELAKQANGACMIHYGDTSVLTAATASKQPKDLPFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKATLTSRLIDRPIRPLFPDGFRNEVQVISTVMSV
DQDCSSEMAAMIGSSIALSVSDIPFAEPIAGVKIGRVDGEFIINPGVEQEAKSDIDLTVA
GTKDAINMVEAGAEEVPEETMLEAIMFGHEEIQRLVAFQEDIVQAVGALKSEVSLFESDE
EIVAKVEEQAKEKMVAAIQVTEKHAREEAIDVVKDEVLEAYEEEEPEIITQVKSALDKIV
KEEVRRLITKEKIRPDGRKVDEIRSLSSRINVFPRTHGSGLFTRGQTQALSICTLGALGD
VQILDGLDLEESKRFMHHYNFPQYSVGETGPIRGPGRREIGHGALGERALEKVVPSDKEF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGDDYSILSDI
QGMEDALGDMDFKVAGTEKGVTALQMDIKIDGLSKEILKEALHQAKIGRMHILDSMLATI
EQPKEELSEYAPKILTMNINPDKIRSVIGPSGKQINKIIEETGVKIDIEQDGGVFISSTD
ASMNKKAKKIIDDLVREVEVGEMYLGTVKRIEKFGAFVELFKGKDGLVHISELQEERTNK
VEDVVSIGDEIMVKVKEIDNQGRINLSRKAVLKEEKEKQQEAK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaaaacaggttttttcaacagagattgcaggtaaaccgtttactgtcgaa
ataggtgaactcgctaaacaggctaatggcgcatgtatgattcactatggagacacttca
gtattaactgcagctacagcatcaaaacaaccaaaggatcttccgtttttcccattaact
gtaaactatgaagaacgtttatatgcagtgggcaaaattcccgggggctttatcaaacgt
gagggtagaccaagtgagaaggcaaccttaacttcacgcttaattgaccgccctattcgt
ccattatttccggatggctttagaaatgaagttcaagttatttcaacggtaatgagtgtt
gatcaggattgttcatctgaaatggcagcaatgattggctcatctattgctttaagtgtt
tctgatatcccattcgccgaaccaattgctggtgttaaaatcggacgagttgacggggag
tttatcatcaatccaggtgttgagcaggaagcaaaaagtgatattgatttaacggtagcc
ggcacaaaagacgcaatcaatatggtggaagccggagcagaggaagtccctgaagaaaca
atgcttgaagctattatgtttggccatgaagaaattcagcgactggttgcatttcaagaa
gatattgtacaagctgtaggtgccctgaaatcagaggtctccctatttgaatcagatgaa
gaaatagttgccaaagtagaggaacaagcaaaagaaaaaatggttgcagcaattcaagtt
actgagaaacatgcaagagaagaagcaattgatgtggtaaaagatgaagttcttgaggca
tatgaggaagaagaacctgagattattacacaagtgaaatctgctctcgataaaatagtt
aaagaagaggtacgtcgcctaattacaaaagaaaagatacgcccggatggtcgtaaggtt
gatgagattcgttcattatcatcacgaattaatgtatttccgagaacacatggatccggt
ctctttacacgtggacaaacccaggcactaagtatctgtacgcttggagccttaggggat
gttcaaatattggatgggcttgatctggaagagtcgaagcgattcatgcatcattataat
ttcccacaatacagtgttggtgaaacaggacctattagaggcccaggccgccgtgagatt
ggacatggggcattgggagaaagagcacttgaaaaagttgtcccttcagataaggaattt
ccatataccattcgcttagtatcagaagtgttggaatccaatggttctacatcacaggcg
agtatctgtgcaagtacgcttgctatgatggatgcaggggtacctattaaagcaccagtt
gccggaattgctatggggctagttaaatccggggatgattattccatattatcggatatt
caaggcatggaagacgctttaggagatatggactttaaagttgccggaactgaaaagggt
gttacggcattacaaatggatattaaaattgacggcctgtccaaagagattttaaaagag
gcattacatcaggctaaaattggacgcatgcatattttagattccatgctggctacaatt
gaacaacctaaagaggaactgtctgagtatgcacctaaaattttaaccatgaacattaat
ccggataaaatccgatccgttattgggccaagtggtaaacagattaataaaatcattgaa
gaaaccggagttaaaattgatattgaacaagacggcggtgtctttatttcatcaacagat
gcctctatgaataagaaagcgaaaaagattattgatgatcttgttagagaagttgaagtt
ggtgaaatgtatttaggtactgtaaaacggattgaaaaattcggagcgtttgtagaattg
tttaaaggaaaagacggtcttgtgcatatttccgaattgcaagaagaacgaacaaacaaa
gtggaagatgttgtttccatcggggacgaaataatggtcaaggtaaaagaaatcgataat
caaggacgtatcaacctttcgcgaaaagcagttctaaaggaagaaaaggaaaaacaacaa
gaagctaaataa
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