Virgibacillus sp. NKC19-16: KFZ58_10540
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Entry
KFZ58_10540 CDS
T08697
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
vik
Virgibacillus sp. NKC19-16
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vik03000
]
KFZ58_10540
Transcription factors [BR:
vik03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
KFZ58_10540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
MarR
HTH_24
HTH_PafC
HTH_Mga
GntR
HTH_AsnC-type
HrcA_DNA-bdg
HTH_20
TFIIE_alpha
HTH_CodY
HTH_IclR
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
UJL44869
LinkDB
All DBs
Position
complement(2038583..2039242)
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AA seq
219 aa
AA seq
DB search
MSQCFLGGEKVELSNRQEQIIEIVKENGPITGEKIADRLHLTRATLRPDLAILTMAGFLE
ARPRVGYFYTGKTGSELLTEKIKEYKVHEFQHVPIVVKENTSVYDAISTMFLEDVGTLFV
VDDHSCITGVLSRKDLLRASIGNQDLNAIPVHIIMTRMPNITVCRKEDLLIDVAQKLINN
QIDGVPVVKDTQAGLEVVGRITKTTITKVFVELIRQDDI
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagtgttttttaggtggtgaaaaggtggaattatcaaataggcaagaacaaatc
attgaaattgttaaagaaaatgggcctattaccggtgagaaaattgcagatcgtctgcac
ctgacaagagctacattgcgaccggatttagctatattaacaatggctggttttttggaa
gcaagaccacgtgttggctatttttacacaggtaaaacaggttctgaattacttactgaa
aaaatcaaagaatataaagtgcatgaattccaacatgtaccaatcgtagtgaaagaaaac
acctcggtatatgatgccatttccacaatgtttttggaggatgtcggcacattgtttgtt
gtggatgatcattcatgtataaccggtgtactttcaagaaaggacttactcagggcaagt
atcggcaatcaggatttaaacgctattcctgttcatattattatgaccagaatgcctaat
ataaccgtttgcagaaaagaggatctattaatcgatgtcgcacagaaattaattaataat
caaatcgatggcgtcccggttgtgaaagatactcaagccggcctggaagtggtaggacgt
attacaaaaacaacgataaccaaagtgtttgttgagctgattagacaagacgatatataa
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