Virgibacillus sp. NKC19-16: KFZ58_11245
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Entry
KFZ58_11245 CDS
T08697
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
vik
Virgibacillus sp. NKC19-16
Pathway
vik00020
Citrate cycle (TCA cycle)
vik00190
Oxidative phosphorylation
vik00650
Butanoate metabolism
vik00720
Other carbon fixation pathways
vik01100
Metabolic pathways
vik01110
Biosynthesis of secondary metabolites
vik01120
Microbial metabolism in diverse environments
vik01200
Carbon metabolism
Module
vik_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vik_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vik_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KFZ58_11245 (sdhB)
00650 Butanoate metabolism
KFZ58_11245 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
KFZ58_11245 (sdhB)
00720 Other carbon fixation pathways
KFZ58_11245 (sdhB)
Enzymes [BR:
vik01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
KFZ58_11245 (sdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_20
Fer4_16
Fer4_4
Fer4_3
Fer4_21
Fer4_18
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
UJL44997
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Position
complement(2172738..2173502)
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AA seq
254 aa
AA seq
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MAEEQTVTFIITRQDDPESAPYEETFNVPYRKNMNVISGLMAIRENPVNANGEDTAPVYW
DMNCLEEVCGACSMVINGTAAQSCAALVDDLEQPIRLAPMDTFPVVRDLIVDREGMFDAL
KQIKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNDKSNFIGPAAL
SQVRLFNSHPTGEMNASERLEGLMEDGGIDGCGNAQNCVQVCPKGIPLTTSIAAMNRSTN
IQAFKSFFGSDNAH
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaacaaacagtaacatttatcataacaagacaagatgacccggaatcagcc
ccatatgaggaaacgtttaatgtcccttatcgtaaaaatatgaatgttatttccggatta
atggcaattcgagaaaatccggtaaacgcaaatggggaagacacggcaccggtttattgg
gatatgaattgcctcgaagaagtctgcggtgcttgttccatggtcattaatggtactgcc
gcgcaatcctgtgcagctttagttgatgatttagaacagccgattcgtctagcaccgatg
gacacgtttccggttgtccgtgatttgattgtggatcgtgagggcatgttcgacgctctg
aaacaaatcaaagcatggattccaattgatggtacgtatgatcttgggccaggaccccgt
atgccggagaaaaaacgtcaatgggcatatgagctgtcaaaatgtatgacatgcggtgtt
tgcctggaagcttgtccaaatgtgaatgataagtcaaactttattggaccagctgctctg
tcacaggttcgtttatttaactctcatccaacaggtgaaatgaatgctagtgagagatta
gaaggtttaatggaagatggaggaattgatggttgcggaaatgcccaaaactgtgtacag
gtttgtcctaaaggtattccattaacaacttccattgctgcaatgaatcgttcaacgaat
attcaagcattcaagagtttctttggcagtgataatgcacactaa
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