Virgibacillus sp. NKC19-16: KFZ58_12815
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Entry
KFZ58_12815 CDS
T08697
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
Organism
vik
Virgibacillus sp. NKC19-16
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_23
HTH_38
Sigma70_r4
FliD_C
HTH_20
LacI
HTH_IclR
MarR
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UJL45287
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Position
complement(2485859..2487139)
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AA seq
426 aa
AA seq
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MRPRLVQEQTLQWKMNQSLLQAIHILQFDSVELIDYIKEVSKENPLIEEVNYDYDIAQYR
THNSNPAAIGEINQAELTMYDHLKNQLYTLDMSEELKPIVLFGIDSLDDDGYLMIDLDLW
ADQCNTTAEMVEHALGKIQKLDPVGIGARTLSECILLQLKQMDMNQSFIEDLLKEHLDWI
AEENIGSIAAHYQTTEEVATKIIKHIQSCHPKPGKLLETEKPEYIIPEASIYKEDGTWKV
SFYKWNSPTIEVNQAYVNLKDIEKEAAMYLKEKYKQVDFLQQAIKYRSNTLELVVKNIVE
KQYMYFEHGAFMLQPLTLREIASDLDIHVSTVSRTINNKYVQTNHGVTPIKFFLQPGVKQ
TNGKQTASFVIKQLIHEFIQYENKAKPLSDEQIKRKLDDEFGIKVARRTIMKYREQLNLP
SSTKRK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgaggcttgtccaggagcagacattacaatggaagatgaatcaatcgcttttg
caggcgattcatattcttcagtttgatagtgttgaattgatcgattatattaaagaggtg
tccaaggaaaatccactgattgaagaggtcaattatgattatgatattgcgcaatataga
acgcataactccaatcctgctgcaataggcgaaattaatcaagctgagctgaccatgtat
gatcacctgaaaaatcagctgtatacattggatatgtccgaggaacttaagccgattgtt
ttatttggaattgactccctggatgatgatggttatttaatgatcgatcttgatctgtgg
gcggaccagtgtaatacgacagcggaaatggtggaacatgctctaggaaagattcaaaaa
ctagatcctgttggcatcggtgccaggacgcttagtgaatgcatattattacaattaaaa
caaatggatatgaaccagtcatttatagaagacttactaaaagagcatctggattggatt
gctgaggaaaatataggatcaatcgcagcacattatcaaacaactgaagaagtggcaacg
aagatcattaaacatattcagtcatgtcatccgaagcccggaaaactgttagaaacggaa
aaacctgaatatattattcctgaagcgtctatttataaggaagatggaacgtggaaagta
tctttttataaatggaattcaccaacaattgaagttaatcaagcctacgtgaatttaaag
gatatagaaaaggaagcagccatgtacctgaaagaaaaatataaacaagttgacttcctg
cagcaggcgattaaatatcgatccaatacattagagcttgttgttaaaaatatagtagaa
aagcaatatatgtattttgagcatggcgcatttatgctgcaaccactgacattaagggaa
attgcgagtgacttagacatacatgtatcaaccgtgagccgaacgattaataacaaatat
gtgcaaacaaatcatggcgttacaccgattaaattcttccttcagccaggggttaaacaa
acaaatggaaagcaaactgcttcttttgtcatcaagcagttaatacatgaatttattcaa
tatgaaaataaagcaaagcccctgtcagatgaacaaattaaaaggaaattagatgatgag
tttggtattaaggttgcgcgcagaaccattatgaaatatcgcgaacaattaaacctacca
tcgtccacaaaacggaaataa
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