Virgibacillus sp. NKC19-16: KFZ58_14735
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Entry
KFZ58_14735 CDS
T08697
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vik
Virgibacillus sp. NKC19-16
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_14735
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFZ58_14735
Archaeal homologous recombinant proteins
KFZ58_14735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UJL45636
LinkDB
All DBs
Position
complement(2887843..2890932)
Genome browser
AA seq
1029 aa
AA seq
DB search
MKPLKLTLTAFGPYKNTEVIDFNDLEGNRLFVIAGNTGAGKTTIFDGICFALYGSASGQD
RENSMMLRSDFANDDTHTSVELLFELKGCTYRVLRQLGHVKKGNKSKTGERYAFFEIVDG
SEVPCVDRQIVSEIDKKIEVLMGLTQDQFKQIVMLPQGEFRKLLTSQTENKEEILRRLFK
TEPYQQISERLRTKKKAIEDAFNQAKQTRDNYIEHIRASLPMREESLIFQVLSEEHYNEH
QIIDGLDAELSFYAQQISMDQKKYEEAYKAHDKKQTEFHQAQALNERFEELSRKEGRLKE
LKSQVPLYEKKQKQLEDAERASKIVPYENQRQEWRAEEKNKTKILHDAENAKKLADDSVE
KVQIIYQQEEAKQTEREDIRRQLDRFQEFLPIVKEIDVKKQQVQELKNKEKHAFNQLQKL
QAEIKDKKAKTENYNEQIKVMDQQVSQLPDKQQKLIDMREQAKVLIDFLDLSEKQAEHKK
EETHRKEVFEKQKETYTTLEKTWLNDQAHVLASHLHDGEACPVCGSHDHPRKATSESEMI
TKEQLDSAKQELDEKDKLYRTAAANLESITAQLKEKERAVASYSVQVDAVSTAKDQIVDE
GKKLKAEVNELQTIREKLAKYKEEYEQTNEAYKQLEAKEKEAEKAHQQAKTDYETDLAVY
QERIQRIPEEVRALSVLEQKIKETESVKNQLEKSWQDAQTKLQQARDEQTKATSNLTNAN
KQVEEAKTKRQKCDQQFIDALTQAAFDEEQAYQQAKMPERDSQHLKNDIELFNQNRSTLQ
EQVAELKDALKDKQHVDLRVLQERLSELKQAYEAAFKKWNQSKEYHQEAASLKTSIMDAN
VRVRETEKNLSTITDLYDVIRGQNMQKVSFERYLQIEYLEQIIDAANQRMKRLSNGQFFL
MRSDRQESHGRQSGLTLDVYDAYTGQTRDVKTLSGGEKFNASLCLALGMSDVIQSFQGNI
SIETMFIDEGFGTLDEESLNKAIDALVDLQKSGRMIGVISHVQELKTIFPAVLEVRKTKE
GSSRTQFVV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccactcaaattaacattgacggcatttggaccttataaaaatacagaagtcatt
gattttaatgatttagagggtaatcgtctgtttgtaattgccgggaatacgggagctgga
aagacgacgatttttgatgggatttgttttgccttgtatgggtcggctagtgggcaagac
cgggaaaatagtatgatgctccgaagtgattttgcaaatgatgatacacatacgtcggtt
gaacttctatttgaattaaaggggtgtacctatcgtgtgctccggcaattggggcatgtg
aaaaaaggaaataagtcgaaaaccggggagcgctatgcgttttttgaaatagtagatgga
agtgaagtcccttgtgtggaccggcaaattgtttccgagattgataaaaagatagaagtt
ttaatgggcttaacgcaagatcaatttaagcagatcgtcatgctgccacagggtgaattt
cgaaaactgttaacctcccaaacggaaaataaggaggaaattttgcgccggctttttaaa
actgaaccgtaccaacaaatcagtgagcgattgcggacgaagaaaaaggcgatagaagat
gcgtttaatcaagccaaacaaacgcgggataattatatcgaacatattcgcgcgagcctt
ccaatgcgcgaagaatctcttattttccaagtgttatccgaggagcactataatgaacat
cagattatcgacggattggatgcggagctcagcttttacgcccagcaaataagcatggat
cagaaaaaatatgaagaagcatacaaagcgcatgataaaaagcagaccgagttccaccag
gcgcaagcactaaatgagcgttttgaagagttgagtcgaaaagagggccggttgaaggaa
ctaaaaagtcaagtccccttatatgaaaaaaagcaaaaacagcttgaagatgccgaacgt
gcaagcaaaattgtgccatatgaaaatcaaaggcaagaatggcgagcggaagaaaagaac
aagacaaagattctacatgatgctgaaaacgcaaagaaattagctgacgatagcgttgaa
aaggtccagatcatctatcagcaggaggaagcgaaacagacggaaagggaagacatccgc
agacaactcgatcgttttcaagaatttttaccaatcgtcaaagaaatcgatgtaaaaaaa
caacaggtacaggagctgaagaacaaagaaaagcacgccttcaatcagctgcaaaagctc
caggcagaaatcaaagataaaaaggctaaaacggaaaattataatgagcagatcaaggta
atggatcaacaagttagccaactgccggacaaacagcaaaaattaatagacatgcgggaa
caagcaaaagtgttgatcgatttcctagatttaagcgaaaaacaagctgaacacaagaag
gaagaaacccacaggaaggaagtttttgaaaaacaaaaagaaacctataccacattagag
aaaacgtggcttaatgatcaggcgcatgttttagccagccacctgcatgacggggaggct
tgcccggtttgtgggagtcacgatcatcctaggaaagctacaagtgaatccgaaatgatc
acaaaagagcaactcgattctgcaaagcaggagttggatgagaaggacaagctttaccga
actgcagctgctaatctggaatccattacagcacaattgaaggaaaaagagcgtgcagtt
gcatcctattcggtacaggttgacgcggtatcaacagctaaagaccaaatcgttgatgaa
ggaaaaaaactaaaagcagaagtaaatgagcttcagaccataagggaaaagcttgctaaa
tataaggaagaatatgaacagacaaatgaagcttacaagcagctggaagcaaaagaaaaa
gaggctgaaaaagcacatcagcaagccaaaacagattatgaaacggatctcgccgtttac
caggaaagaatacagcgcatccctgaggaagtaagggcgttatctgtattagaacagaag
ataaaggaaacggaaagcgttaaaaaccagctggaaaagtcttggcaggacgcgcagaca
aagctgcagcaagcgagagacgaacaaacaaaagctaccagcaatctcaccaatgcgaat
aagcaagtagaagaggcgaaaacgaagcgacaaaagtgcgatcagcagtttatcgacgca
cttacgcaggctgcttttgacgaggaacaagcgtatcagcaagcgaagatgcctgaacga
gactcacagcatttgaaaaatgatattgagctttttaaccaaaatcgatcaacattacag
gaacaagtagctgaattaaaagacgcactaaaagacaagcaacatgtggatttacgtgtc
ttgcaagaacgattgagtgagttaaaacaagcttatgaagcagcgtttaaaaaatggaat
caatccaaggaatatcatcaagaagcagcgtcgctgaagacaagtatcatggatgcaaac
gtgcgcgttcgcgaaacggaaaagaacttgagcactattacggatttatatgacgtcatc
agaggtcagaacatgcaaaaagtctcattcgagcggtatctgcaaatcgaatacttagag
caaatcattgacgctgcaaaccagcgcatgaagcgcctgtccaatggccaatttttcctg
atgcgaagtgatcgccaggaatcccacggaaggcaaagcggactcacacttgatgtttat
gatgcctataccgggcaaacgagggatgtcaagacattgtcaggcggggaaaagtttaat
gcctccctatgtttagcactcggcatgtccgatgtgattcaaagttttcaaggaaatatt
tcaattgaaaccatgttcattgatgaaggtttcggtacattagatgaggaatcgctgaat
aaagcaatcgatgcactggttgacctgcaaaaatcaggccggatgattggcgttatttcc
catgtacaagagttaaaaacgatttttccggcagtgcttgaggtgaggaaaacaaaagag
ggttcaagtcggacccaatttgtggtgtga
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