Virgibacillus sp. NKC19-16: KFZ58_14740
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Entry
KFZ58_14740 CDS
T08697
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vik
Virgibacillus sp. NKC19-16
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_14740
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFZ58_14740
Archaeal homologous recombinant proteins
KFZ58_14740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
FlgO
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
UJL45637
LinkDB
All DBs
Position
complement(2890960..2892144)
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AA seq
394 aa
AA seq
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MKFFHTADWHLGKLVQGVYMTEDQDYILRQFIQAVEAEKPDAVIIAGDLYDRAVPPTEAV
HLLDEVLETIVLKLKTPVLAVAGNHDSPSRLNFGSGIMQNNGFHIVGNFTSGMQPIILND
AHGEVHFHLVPYCDPSTVRNILDDDTIRTHNDASEKIVEHITANMDEKARHVFVGHAFVT
PYGEEEENTSESERPLSIGGSEYVDARHFSSFHYTALGHLHQAHYVSDEATRYAGSILKF
SISEEHHKKGYHVVEMDEHGDVTIQKRHLTPSRDMRTVEASLEEIMTHSVSEDYVFVRLT
DETAVLSPMEKIRSVYPNAMHVERKNYFHAPSSEDGERSVERTQMNDLELFQAFYKEVKG
QEATEETEVIFKEVLDDLLKENNETEKQKDYVTN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttttcatacggcggattggcatttggggaaacttgttcagggtgtttatatg
acggaggatcaggattacatactgcggcagtttattcaggctgtggaagcggaaaagccg
gatgctgttattattgctggtgatttatatgatcgggcggtgccgcctactgaggctgtt
catcttttggatgaggtgcttgagacgattgtgttgaaattgaaaacgccagttcttgct
gttgcgggcaatcatgatagcccgagcaggttaaattttggaagtggcattatgcaaaac
aatggctttcatattgtggggaatttcacaagcggtatgcagccgatcattttaaacgac
gcgcatggggaagttcattttcatctcgtcccgtattgtgatccgagtaccgtcagaaat
attttagatgatgatacgatccgcacgcataatgatgcatcggaaaagatagttgaacat
attacagcgaatatggacgaaaaagcccgtcatgtttttgtcggacatgcctttgttacg
ccatatggcgaagaagaggaaaatactagtgaatcggaacggccgctctccattggcgga
tcggaatatgtggacgcgcgccatttttcatcctttcattatacggcacttggccatttg
catcaggcgcattacgtgtctgatgaggcgactcgttatgctggatccattttaaaattt
tcgatatcagaagagcatcataaaaaaggatatcatgtcgtggagatggatgaacatggg
gatgttacgatccaaaaacgtcatctgaccccaagcagggatatgcgcacagtggaggca
tctctcgaggaaataatgacacattcggtgagtgaagattatgtgtttgttcggttaaca
gatgaaacagcagtcctttcaccgatggaaaaaatcaggtcggtctatccgaatgcgatg
catgtggagcgtaaaaattactttcacgctccttcgtctgaagatggcgagagatcagtc
gaacgtacccaaatgaacgatctggagctttttcaggcattttacaaagaggtgaaaggt
caggaagcaacagaagaaacggaagtcattttcaaagaagtgctggatgatcttttaaaa
gaaaataatgaaacggaaaaacagaaagactatgtcacgaactag
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