Virgibacillus sp. NKC19-16: KFZ58_16730
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Entry
KFZ58_16730 CDS
T08697
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vik
Virgibacillus sp. NKC19-16
Pathway
vik00260
Glycine, serine and threonine metabolism
vik00460
Cyanoamino acid metabolism
vik00630
Glyoxylate and dicarboxylate metabolism
vik00670
One carbon pool by folate
vik00680
Methane metabolism
vik01100
Metabolic pathways
vik01110
Biosynthesis of secondary metabolites
vik01120
Microbial metabolism in diverse environments
vik01200
Carbon metabolism
vik01230
Biosynthesis of amino acids
vik01240
Biosynthesis of cofactors
vik04981
Folate transport and metabolism
Module
vik_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KFZ58_16730
09102 Energy metabolism
00680 Methane metabolism
KFZ58_16730
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KFZ58_16730
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KFZ58_16730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KFZ58_16730
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KFZ58_16730
Enzymes [BR:
vik01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KFZ58_16730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UJL45990
LinkDB
All DBs
Position
complement(3357312..3358547)
Genome browser
AA seq
411 aa
AA seq
DB search
MEHVKQTDPEIFKAIEAERTRQQEKIELIASENFVSEAVMEAMGSVLTNKYAEGYPGKRY
YGGCEHVDVVENIARDRARELFGADHANVQPHSGAQANMAVYAAALEYGDTVLGMNLNHG
GHLTHGSPVNFSGKLYNFEDYGVDKETEQLDYDAVLEKAKEVKPKLIVAGATAYPREIDF
AKFRKIADEVGAYLMVDMAHIAGLVATGLHQNPVPQADFVTTTTHKTLRGPRGGVILCKE
EHAKKVDKSVFPGIQGGPLMHVIAAKATAFKEALSDDFKAYAKQIIENAHVLSEALDNEG
VRVVSGGTDNHLILVDVTPLELTGKVAENVLDDIGITANKNTIPFDTESPFVTSGVRIGT
AAVTSRGFGEAEMKEIAGIISLTLKNHEDEGKLKEAAERVKALTDRFPLYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtaaagcaaacagatccggaaattttcaaggcaatcgaagcagaaagaaca
cgccagcaagagaaaattgagctaatcgcatccgaaaattttgtatcagaagcggtaatg
gaagcaatgggttctgtcttaacaaataaatatgcagaaggatatcctggaaaaagatat
tacggcgggtgtgaacatgtggatgttgttgagaatatagcacgtgatcgcgcgagggaa
cttttcggtgcggaccatgctaacgtacaaccccattccggtgctcaggcgaatatggca
gtctatgctgccgcattggaatatggtgatacagttctagggatgaacctgaatcatggt
ggacacttgacacatggaagccctgtgaattttagtggaaaactttataattttgaggat
tatggtgttgataaagaaaccgagcagctggactatgatgccgttttggaaaaagcaaaa
gaagtgaagccaaaattaattgtcgcaggggcaaccgcataccctcgtgaaattgatttc
gcgaaattccgtaaaatcgccgatgaagttggagcctatctgatggttgatatggcacat
attgccgggctcgtagcaacaggcttgcatcaaaatccggtaccacaagctgatttcgtt
acgacaaccacacataaaacattgcgcggtccccgtggtggtgtgattttatgtaaagaa
gaacacgcaaagaaagttgataaatccgtatttccggggatccaaggcggcccattgatg
catgttatcgctgccaaagcaacagccttcaaggaagctttatcagatgacttcaaagca
tatgcgaagcaaatcatcgaaaatgcacatgtacttagtgaggcattggacaatgaaggt
gtacgagtcgtctcaggtggaacggacaatcatttaatcctagttgatgtaacgccactg
gaactcacaggcaaagtggctgagaacgtattggatgatattggtattactgccaataaa
aatacaatcccgtttgatacagaaagtccatttgtaacaagcggtgtccggataggaaca
gcagctgtcacgtcacgagggtttggcgaagcggaaatgaaggaaatcgcgggcattatt
tcgttaacactgaaaaatcatgaagatgaagggaaattaaaagaagcagcagagcgtgtg
aaggcattgacagatagatttccgttgtatgcataa
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