Virgibacillus sp. NKC19-16: KFZ58_16980
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Entry
KFZ58_16980 CDS
T08697
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
vik
Virgibacillus sp. NKC19-16
Pathway
vik03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KFZ58_16980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_16980
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KFZ58_16980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
BACOVA_00961-like
CDC24_OB3
GET2
Motif
Other DBs
NCBI-ProteinID:
UJL46034
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Position
complement(3411717..3412562)
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AA seq
281 aa
AA seq
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MHTMWKGTISFGLVNIPVKMHAATENKDVKLRQLHKECETPIKYEKTCPNCDKEVGNDDI
VKAYEYAKNKFVILDEEELKELQKEQKDKAVEIVDFVKLEEIDPIYFEKSYYLSPNEGGG
NAYGLLRNSLKDTGKIGVAKMMIRSKEQLAVIRVYENTLVAETIHYPDEVRDAGDVPNVP
DEVTTAQKELDTAKMLIDQLTAEFDPEKYKDDYRASLLELIEEKKNNEETTTADDKSKET
PDNVTDLMGALEASLDKAKKDKPKPKQPKKKTTTAKKKKKA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatgtggaagggtacgatcagctttgggcttgtcaatattcctgtaaaaatg
cacgctgccacggaaaataaagatgtcaaactacgacaattgcataaagaatgcgaaacg
ccaattaaatatgaaaaaacctgtccgaattgtgataaggaagtaggaaatgacgatatc
gttaaagcatatgaatatgccaaaaataaatttgtgattttagatgaagaggaattgaaa
gaattacaaaaagagcaaaaggataaagcagtagagattgtcgactttgtaaaattagag
gaaattgacccgatctattttgaaaaaagctattatctgtcaccaaacgaaggtggcgga
aatgcctatggattactgcggaattccctgaaagacaccgggaaaattggtgtcgcaaaa
atgatgatccggtcaaaggagcagctggctgtcatacgcgtttatgaaaatacattggtt
gctgaaacgattcattatccggatgaagtccgtgacgcgggcgatgttccgaatgtaccg
gatgaagtaacgacagcacagaaagaactcgatacagccaaaatgctgatcgaccaattg
acagctgaattcgacccggaaaaatataaagatgattaccgcgcgtccttgctggaatta
attgaggaaaagaaaaacaacgaagagacaactaccgcagacgacaaaagtaaagaaacg
ccggataatgtaaccgacctaatgggagcacttgaagcctcattggataaagcgaaaaaa
gacaagccaaaaccaaaacagccaaagaaaaagacaactacagctaaaaagaagaagaag
gcgtga
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