Virgibacillus salidurans: KFZ58_17150
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Entry
KFZ58_17150 CDS
T08697
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vik
Virgibacillus salidurans
Pathway
vik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFZ58_17150 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vik03019
]
KFZ58_17150 (recQ)
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_17150 (recQ)
Enzymes [BR:
vik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KFZ58_17150 (recQ)
Messenger RNA biogenesis [BR:
vik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KFZ58_17150 (recQ)
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KFZ58_17150 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
HTH_40
RecQ_Zn_bind
ResIII
Sigma70_r4_2
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UJL46066
LinkDB
All DBs
Position
3446754..3448907
Genome browser
AA seq
717 aa
AA seq
DB search
MLVKEEKILQTYFGYETFRPGQKETINHILNLNNTLAVMPTGGGKSLCYQIPGLSLDGTA
IIISPLISLMKDQVDALHSYGIPATYINSSLSASEQHTRLEDIAAKRYKFVYVAPERFES
MNFVNTIKNIPLALVAFDEAHCISQWGHDFRPSYRSIVPNLKKLANIPVFVALTATATED
VISDISDLLHIETNHVVNTGFERKNLSFHIAKGKDKSSYVRSFLEEHQDESGIIYTATRK
QADALHDQLTRRGIDVAKYHAGLSEDERKQAQAAFIHDEKSIMIATNAFGMGIDKSNVRF
VIHYAMPMNIESYYQEAGRAGRDGEPSDCILLFSPQDIQLQKFLIEQSLMDDASKQQEYR
KLQAMINYCHTHGCLTAQILDYFNDTETTETCGRCSNCVERQEKRDITEEAQMILSCVKR
MGERFGVGMTAKVLKGSKDKKIKDFHLDRISTYGLLSAYTEKGLTEWIHFLIAEQLLATE
EGKFPTLKLNQNSVDVLKGTRPVWMFTAPIPVSEQADYHEDLFSSLRALRKQMAAEKNVP
PYVLFSDATLKELSRYFPVTKEDMLEIKGVGEKKYEQYGAEFLAVIQEWREEHPDVKKKI
RIADTPEPAPKPKRQKTDDDRPSHMVSYQMFQCGKSIKDIAGIREFSQQTIENHIFKAFK
AGYPIAWEIFFNDGEEATVLAAREEIDEPRLKPLREALPEGYSYTMIKAVLVKNGLM
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaaaagaagaaaaaatcctgcaaacctattttggctatgaaacgtttcgccct
gggcaaaaagagacgattaaccatatattaaacttaaataacacgcttgctgtgatgcca
actggcggcggtaaatccttatgctaccagattccgggtttatccctagatggcacagca
atcatcatttccccattaatatcccttatgaaggatcaggttgacgctctccattcatac
ggaattcccgctacatatattaacagttcactttctgcgagtgaacagcacacgcggctc
gaggacatagctgctaagcgctataaattcgtttatgtagctcctgaacgttttgaatcg
atgaattttgtaaacaccattaaaaatatcccgctggcacttgtagctttcgatgaagcg
cactgtatttcacagtggggacatgattttaggcccagctatcgttctattgttcccaac
ttgaaaaaattagcgaatatcccggtttttgttgcattgactgcaacggctacagaggat
gttatttcagatattagcgatttactgcatattgagacaaatcatgtcgtcaacaccgga
ttcgaacgaaaaaatttgtcctttcatattgcaaaaggaaaggacaaatcatcctatgtc
cgttcttttttagaagagcatcaagatgaatcaggaattatttacacagcaactagaaaa
caagcagatgcattgcatgaccaactaacgcgtcgtggtattgatgtagccaaatatcat
gccggattatcagaggatgaacgtaaacaagcacaggctgccttcattcatgatgaaaaa
tctatcatgatcgcgacaaatgcattcgggatggggatcgataaatcgaatgtgcggttc
gtcatccattatgccatgccgatgaatattgagtcctattatcaggaggccggcagagct
ggacgtgacggggaaccgagtgattgtattttattattctccccacaagacattcaatta
cagaaatttttgatcgaacagtcactgatggatgatgcttctaaacaacaggaataccgt
aaattacaggcgatgattaattactgtcatacccatggctgtttaaccgcacaaattctg
gattattttaacgacacggagacaactgaaacttgcgggcggtgcagcaattgtgtggag
cgtcaggagaaaagggatattaccgaagaggcacagatgattctgtcttgcgtcaagcgc
atgggagaacgcttcggtgtaggcatgaccgctaaagttctaaagggctcaaaggataaa
aagataaaagattttcacctggatcgaatttctacttatggcttgctgtctgcttataca
gaaaaagggctgacagaatggatccatttcctgattgcagaacagctattggcgacggaa
gaagggaaattcccgacattaaaattgaatcaaaattcagttgatgtattgaagggaaca
cgccctgtctggatgtttactgcgccaatacctgttagcgaacaagctgattatcatgaa
gacctattctcatctttacgcgcactgcgaaaacaaatggctgccgagaaaaatgtcccg
ccatatgtgctgttttccgatgcaacattgaaggaattaagccgttattttccagttaca
aaagaggatatgctggagatcaagggtgtcggtgagaagaaatatgaacaatacggggcg
gaattccttgctgtcatccaggaatggcgcgaggaacatccggatgtgaagaagaaaatc
cgaatcgccgacacaccagagccggcgcctaaacctaagagacagaaaacggatgacgat
agaccaagtcatatggtgagctatcaaatgtttcagtgcggaaagtcgattaaggatatt
gcaggtatccgggagttttcccagcagacgatagaaaatcacatctttaaggcatttaaa
gccggttatccaattgcctgggagatcttttttaacgatggagaagaagctactgtatta
gcagcacgagaggagattgatgagccgcggctgaagccattgagggaagctttgcctgag
ggatatagttatacgatgattaaggcagttttggttaagaatgggttgatgtag
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