Vulgatibacter incomptus: AKJ08_0837
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Entry
AKJ08_0837 CDS
T04035
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
vin
Vulgatibacter incomptus
Pathway
vin01501
beta-Lactam resistance
vin01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AKJ08_0837
01503 Cationic antimicrobial peptide (CAMP) resistance
AKJ08_0837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vin02000
]
AKJ08_0837
01504 Antimicrobial resistance genes [BR:
vin01504
]
AKJ08_0837
Transporters [BR:
vin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AKJ08_0837
Antimicrobial resistance genes [BR:
vin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AKJ08_0837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
TERF2_RBM
Motif
Other DBs
NCBI-ProteinID:
AKU90450
UniProt:
A0A0K1PAA7
LinkDB
All DBs
Position
complement(998766..1001888)
Genome browser
AA seq
1040 aa
AA seq
DB search
MIRFFVRRPIVAIVISIVFVLVGAVAAFSLPVAEYPDIVPPQIVVSATYPGADALTVEKS
VATPLEQFVNGVEEMLYMQSTNALDGSMSLRVTFKVGSDSNVDEILTQNRVSQGQPFLPA
QVNAVGITVLRTTASPLMVIAIHSPTAAYDGAFLANYATINVIDELSRVEGVAQVINFGA
SQYAMRVWVDPIKMASRGLTVQDLQQALLAQNTVNPAGQIGGEPAASDQPFSFSIIAPGR
LVTAEEFGDIVVRAEPGGAIVRLSDVARLELGTVTYTERARFDGQPSAVLGVFQTPGTNA
LSTVKGVEEHLAKLTKAFPEGVQATVALDTTLPVKDGIREILQTLLIAVLLVMAVVFLFL
ETWRATLIPMLTVPVSLIGAFVLFPILHFSVNTISLLGLVLAIGLVVDDAIVVVEATIRK
IEDGLEPREATLEAVKEVSAPVVSIALILASVFIPVAFVPGITGLLYRQFALTIGISVLI
SAFNALSLSPALCAMLLRPPKPERGPIGRATQAFHRGFERATESYVRLTRVLLRKAWFSV
IVVAVVFVILAGLGRAIPSGLVPTEDEGYFFLELALPKAAALGRTDTATAQVEKVLGRIP
GVAHVTSVVGFSLLSRVATPDNAFFFVALRPWGERSSEETAEKIIAKANEELRSIPAGIA
LGFAPPPLPGLGTSGGFTLFLQDRTGGTPEFLEEQANRFIAAASKRPELSTVRTNFSASV
PQIRLNVDREKALIEGVSLSSLYLTIQAFLGSIFINDFNRFGREWHVYLQAEPEFRRSED
DLRQFYVRGSDGVMVPITTFLSTSPMLGPDFTMRFNLFRAAQLNGTAAPGYSSGQAIKAL
EEVARDVLPAGVTYEWSDLSYQETTAPSPLPTYIFAIVMVFLILAALYESWSLPLSVLLV
TPVAVLGAFLGLLSRGYSSDVFGQIALIMLMGLSAKNAILIVQFARERQLKEDMAPAEAA
VAGAQLRLRPIMMTSLAFILGVLPLAFASGAGSLSRREIGTAVIVGMIFTTILGLLLVPA
AYLVVEQIVLWLQRSRKREP
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgcttcttcgttcgaaggccgatcgtcgcgatcgtgatctcgatcgtcttcgtg
ctcgtgggggccgtcgccgcgttctcgctccccgtcgccgagtacccggacatcgtcccg
ccgcagatcgtcgtgagcgccacctaccccggcgcggacgcgctgaccgtcgagaagtcg
gtcgcgaccccattggagcagttcgtgaacggggtcgaggagatgctctacatgcagtcc
acgaacgcgctcgacgggtcaatgagcctgcgggtcacgttcaaggtgggctccgactcc
aacgtcgacgagatcctgacgcagaaccgggtcagccaggggcagcccttcctccccgcc
caggtcaacgcggtcgggatcaccgtgctgcgcacgacggcgtcgccgctgatggtgatc
gccatccactcgcccaccgcggcttacgacggggccttcctggccaactacgcgacgatc
aacgtcatcgatgagctctcccgggtcgagggcgtggcgcaggtcatcaacttcggtgcg
agccaatacgcgatgcgggtctgggtggatcccatcaaaatggcgtcgcgcggcctcacc
gtccaggatctgcagcaggcgctcctcgcccagaacacggtcaatcccgccgggcagatc
ggtggggagcccgcggcctccgaccagccgttcagcttctcgatcatcgcgcccggcagg
ctggtcacggccgaggaattcggagacatcgtcgtccgcgcggagcccggcggggcgatc
gttcgcctctccgacgtggcaaggctcgagctcggcaccgtgacctacaccgagcgagcc
cggttcgacggtcagccctcggcggtcctgggggtcttccagacgccgggaaccaacgcg
ctctcgaccgtcaagggggtcgaagagcacctcgccaagctcacgaaggcgtttccagaa
ggggtgcaagccaccgtcgccctcgacacgaccctcccggtaaaggacgggatccgggag
atccttcaaacgctgctcattgccgtgctgctcgtgatggcggtggtcttcctcttcctg
gagacctggagggccacgctgatcccaatgctgacggtcccggtgtcgctgatcggggcc
ttcgtgctcttcccgatcctccacttctccgtcaacacgatctccctgctggggctggtg
ctggccatcggcctggtcgtggacgacgcgatcgtcgtggtcgaggcgacgatccggaag
atcgaggacggcctcgagcctcgggaggcgaccctggaggcggtgaaggaggtctcggca
ccggtggtgagcatcgccctcatcctggcgtcggtgttcatcccggtcgccttcgtgccg
gggatcacgggcctcctctaccgccagttcgccctgaccatcgggatctcggtgctgatc
agcgccttcaacgccctctccctgtctccggcgctgtgcgcgatgctgctccgtcctccc
aagccggagcgcgggccgatcgggcgggccacgcaggcgttccaccggggcttcgagcgc
gccaccgaatcctacgtgcggctcacccgtgtcctgctccgaaaggcctggttctcggtc
atcgtggtggccgtggtcttcgtgatcctcgcgggcctcggccgcgcgatcccctccggc
ctcgtgccgaccgaggacgagggctatttcttcctggagctcgccctcccgaaggcagct
gccctcggtcgaaccgacaccgccaccgcgcaggtagagaaggtcctcgggcgcatcccg
ggggtcgcgcacgtcaccagcgtcgtgggcttctcgctcctctccagagtggccacgccg
gacaacgccttcttcttcgtggccctccgcccatggggcgagcggagctccgaggagacg
gccgaaaagatcatcgcgaaggcaaacgaggagcttcgcagcatcccggccgggatcgcg
ctgggcttcgcgccgccgccgctcccgggcctgggcacgagcggaggcttcacgctcttc
ctccaggatcgcaccggcggcacgccggagttcctggaggagcaggccaaccgcttcatc
gccgcggccagcaagcgcccggagctgagcaccgtccgcacgaacttcagcgcgtccgtt
ccacagatcaggctgaacgtcgatcgcgagaaggcgctcatcgagggcgtgagcctgtcg
tccctctacctcaccatccaggccttcctcggaagcatcttcataaacgacttcaaccgg
ttcgggagggagtggcacgtctacctgcaagcggagccggagttccggcgatccgaggac
gacctgcgccaattctacgttcgcggctccgacggcgtgatggtcccgatcaccaccttc
ctgtccacgagccccatgctgggccccgacttcaccatgcgcttcaacctctttcgcgcc
gcgcagctcaacggcaccgccgcgccgggctactcttcggggcaagcgatcaaggcgctg
gaggaggtggcgcgggatgtcctgcccgcaggcgtcacctacgagtggtcggatctctcg
taccaggagacgacggcgccgagcccgctccccacgtacatcttcgcgatcgtcatggtc
ttcctgatcctcgctgccctgtacgagagctggtccctcccgctcagcgtgctgctggtg
acgccggtggcggtgctcggcgcgttcctcgggctgctctcgcgagggtactcctccgac
gtcttcgggcagatcgcgctgatcatgctgatgggcctgtcggcgaagaacgcgatcctg
atcgtgcagttcgcccgggagcggcagctcaaggaggacatggcgccggcggaagcggcg
gtcgcgggagcccagctgcggttgcggcccatcatgatgacgtcgctcgcattcatcctg
ggcgtgcttccgctcgccttcgcgagcggggcgggctcgctctcgcgacgcgagatcggg
accgcggtgatcgtcgggatgatcttcacgacgatccttgggctcctcctggtcccggcc
gcctacctcgtggtcgagcagatcgtcctctggctccaacgcagtagaaagcgagagcca
tga
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