Vulgatibacter incomptus: AKJ08_1792 Help Entry AKJ08_1792        CDS       T04035                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism vin  Vulgatibacter incomptus Pathway vin03030   DNA replication vin03410   Base excision repair vin03420   Nucleotide excision repair vin03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vin00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AKJ08_1792    03410 Base excision repair     AKJ08_1792    03420 Nucleotide excision repair     AKJ08_1792    03430 Mismatch repair     AKJ08_1792  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vin03032]     AKJ08_1792    03400 DNA repair and recombination proteins [BR:vin03400]     AKJ08_1792 Enzymes [BR:vin01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AKJ08_1792 DNA replication proteins [BR:vin03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AKJ08_1792 DNA repair and recombination proteins [BR:vin03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AKJ08_1792    NER (nucleotide excision repair)     GGR (global genome repair) factors      AKJ08_1792    MMR (mismatch excision repair)     DNA ligase      AKJ08_1792   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AKJ08_1792 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH_5 BRCT_2 Motif Other DBs NCBI-ProteinID:  AKU91405 UniProt:  A0A0K1PD07 LinkDB All DBs Position 2129241..2131400 Genome browser AA seq 719 aa AA seqDB search MATSSPQESERIDALRAEIREHDHRYYVLDAPIVSDAEYDSLFRELQALEAAHPELVTPD SPTQRVGGAPAEGFEKITHRVPMLSLANAFEEEELDDFDLRLRRLLQQLHRDADPADVDP KVRPFVAPEETPPFPFFCEPKFDGLAVELVYEDGVFVRGATRGDGEVGEDITANLRTIRS VPLSLEKKVPGRLEVRGEAVMLRADFEALNRRQEEARDAELRRREEDPEARHRALPRLFA NPRNAAAGALRQLDPKITASRPLTFYAYEVAEETGGFERHSSRLEWLEELGFRLSGEATR ASGIDEAKAYCERLLSRRHELPYQIDGVVVKVDDDVLRQELGAVARSPRWAVAFKFAPEE ATTRVEKIDVQVGRTGVLTPVAFLEPVHVGGVMVSRATLHNEDELRRKDVREGDRVVVRR AGDVIPEVVSVVAEVRTGEEREFVFPKLCPSCGSEVFREEEKAAWRCINATCPAQLEGRI IHFASRRAMDIEGLGEEIAGQLVSKGLVKDFGDLYDLSAEQWAALDRVVGDKIYQLGALV GGKLTDAVEKSKHCRLRSFYNALGIHLVSEEMSKRLAQRFTDVRGLFDADAFAVEAVEGF GPERAKAVVAFFHNPKNQRVIEHLLAVGVEPEPEAKAAGGIFAGKTVVLTGTLTRFSRDE AKDRIESQGGKAAGSVSKKTDFVVAGAEAGSKLKKAQELGIPVLDEERFLEMLGVGGEA NT seq 2160 nt NT seq  +upstreamnt  +downstreamnt atggctacctcctctccgcaggaatccgaacggatcgacgcgctccgcgccgagattcgc gagcacgatcaccgctattacgtactcgacgcgccgatcgtctcggacgccgagtacgat tcgctcttccgcgagctccaggcgctcgaagcggcccaccccgagctcgtcaccccggac tccccgacccagcgggtgggaggcgcgccggcggagggcttcgagaagatcacccaccgg gtgccgatgctctccctcgcgaacgccttcgaggaggaggagctcgacgacttcgacctc cggcttcggcgcctgctccagcagctccatcgcgacgccgatcccgccgatgtggatccg aaggtgcgccccttcgtggcgccggaagagacgccccccttccccttcttctgcgagccg aagttcgacggcctcgcggtggagctggtctacgaggacggcgtcttcgtccggggcgcc acccgcggcgacggcgaggtcggcgaggacatcaccgccaacttgcgcacgatccgctcg gtcccgctctccctcgagaagaaggtccccggcaggctggaggtccggggcgaggcggtg atgctccgcgccgacttcgaggcgctgaaccgccgccaggaggaggcccgcgacgcggag ctccggaggcgggaggaggatcccgaggcccgccatcgggcgctcccgaggctcttcgcg aacccgcgcaacgccgcggcgggcgcgctccgccagctcgatccgaagatcaccgcgagc cgccccctcaccttctacgcctacgaggtcgccgaggagacgggcggcttcgagcggcac agcagccgcctcgagtggctcgaggagctgggcttccgcctctcgggcgaggccacgcgg gcgagcgggatcgacgaggcgaaggcgtactgcgagcggctgctctccaggcgccacgag ctgccctaccagatcgacggcgtggtcgtgaaagtcgacgatgacgtcctccgccaggag ctcggcgccgtcgccaggagcccccgctgggcggtggccttcaagttcgctcccgaggag gccaccacccgcgtggagaagatcgacgtgcaggtcggcaggaccggtgtgctcaccccg gtcgccttcctcgagcccgtgcacgtcggcggcgtgatggtctcgcgggccacgctgcac aacgaggacgagctccgccggaaggacgtgcgcgagggcgatcgcgtggtggtccggcgc gcgggcgacgtgatccccgaggtggtctcggtggtcgccgaggtgcgcacgggcgaggag agggaattcgtgttccccaagctctgcccctcctgcgggagcgaggtcttccgcgaggag gagaaggcggcgtggcgctgcatcaacgccacgtgcccggcgcagctcgaaggccggatc atccacttcgcgagccggcgcgccatggacatcgagggcctgggcgaggagatcgccggc cagctcgtgtccaaggggctcgtgaaggacttcggcgacctctacgacctctccgccgag cagtgggccgccctcgatcgcgtcgtgggcgacaagatctaccagctcggcgccctcgtc ggcggcaagctcacagacgcggtggagaagagcaagcactgccggttgcggagcttctac aacgccctcgggatccacctggtgagcgaggagatgagcaagaggctggcgcagcgcttc accgacgtgcgcggcctcttcgatgccgacgcgttcgcggtcgaggcggtcgaggggttc gggccggagcgcgcgaaggcggtggtcgcgttcttccacaacccgaagaaccagcgggtg atcgagcacctcctcgccgtgggcgtcgagccggagccggaggcgaaggcggccgggggc atcttcgccggcaagaccgtggtcctcaccgggaccctcacccgcttcagccgggacgaa gcgaaggaccggatcgagagccagggcgggaaggccgcgggctcggtgtcgaagaagacc gacttcgtggtcgccggcgccgaggcgggcagcaagctgaagaaggcgcaggagctcggg atcccggtcctcgacgaggagcggttcctcgagatgttgggcgtgggaggcgaggcgtga

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