Vibrio sp. NTOU-M3: AB2S62_14270
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Entry
AB2S62_14270 CDS
T10494
Symbol
vmeD
Name
(GenBank) multidrug efflux RND transporter permease subunit VmeD
KO
K18138
multidrug efflux pump
Organism
vio Vibrio sp. NTOU-M3
Pathway
vio01501
beta-Lactam resistance
vio01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB2S62_14270 (vmeD)
01503 Cationic antimicrobial peptide (CAMP) resistance
AB2S62_14270 (vmeD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vio02000
]
AB2S62_14270 (vmeD)
01504 Antimicrobial resistance genes [BR:
vio01504
]
AB2S62_14270 (vmeD)
Transporters [BR:
vio02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AB2S62_14270 (vmeD)
Antimicrobial resistance genes [BR:
vio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB2S62_14270 (vmeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
XDE86426
LinkDB
All DBs
Position
I:3183351..3186473
Genome browser
AA seq
1040 aa
AA seq
DB search
MRFTDVFIKRPVLAVSISFLIALLGLQAVFKMQVREYPEMTNTVVTVTTSYYGASADLIQ
GFITQPLEQAVAQADNIDYMTSQSVLGKSTITVNMKLNTDPNAALSDILAKTNSVRSQLP
KEAEDPTVTMSTGATTAVLYIGFTSDELSSSQITDYLERVINPQLFTINGVSKVDLYGGM
KYALRVWLDPAKMAALKLTATDVMGVLNANNYQSATGQVTGEFVLYNGSADTQVSNVDEL
KNLVVKSGEGEVIRLGDIAKVTLEKSHDVYRASANGQEAVVAAINAAPSANPINIAADVL
DLLPQLERNLPSNIKMNVMYDSTIAINESIHEVIKTIIEAAVIVLVVITLFLGSFRAVVI
PIVTIPLSLIGVAMVMQGMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHLKEGESPF
RAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGAVFVSGIVALTL
SPMMCSKMLKANEKPSKFEQKVHHVLEGMTNRYEGMLRAVMAHRPVVIAFALIVFASLPV
LFKFIPSELAPSEDKGVVVLMGTGPSNANLDYLQNTMNDVNKILSDQPEVEFAQVFTGVP
NSNQAFGLATLKPWSQREASQADVTKRVGDLVSDVPGMAVTAFQMPELPGAGSGLPIQFV
VTTPNSFESLYTIASDILTEVTSSPMFVYSDLDLKYDSATMKIKIDKDKAGAYGVTMQDI
GVTLGTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMKNYYVRAADGKAVPLGSLIT
IDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENIAETKLPTGYNHDYMGEARQ
FVTEGSALYATFGLALAIIFLVLAIQFESIRDPIVIMVSVPLAVCGALIALAWGMATMNI
YSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMEAAKVRLRPILMTTAAMIAG
LIPLMYATGAGAAQRFSIGIVIVAGLAIGTLFTLFVLPVIYSYLAEKHKPLPVFVEDKDL
EKLARVDEAKAAQRQIAEQQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttactgatgtttttataaaacgtccagttttagcggtatcgatcagctttttg
atcgctttgcttggtttacaagcggtgttcaaaatgcaggttcgtgaataccctgaaatg
acaaataccgtcgtgacggtgacaaccagttactacggtgccagtgccgaccttatccaa
ggctttattactcagccattggagcaggccgttgcgcaggcagacaatattgactacatg
acttcccagtcggtgttgggtaaatccaccatcacggtgaacatgaagctcaataccgat
ccgaatgcggcactgtctgacattctggcaaaaaccaactcggtacgctctcaacttcct
aaagaagcagaggaccctaccgtaaccatgtcgaccggtgccaccaccgcagtactgtac
attggctttaccagtgacgagttgtcttcaagtcagatcactgattaccttgaacgtgta
attaacccacagctattcaccattaatggtgtttctaaagtggacttatacggtggtatg
aaatacgcacttcgcgtttggctagacccagcgaaaatggcggcactcaaactgacggca
acagatgtcatgggtgtgttgaatgccaacaactaccagtcagcaacaggtcaggttact
ggtgaattcgtgctctacaacggcagcgcggatactcaagtatccaacgtggatgagctg
aaaaatctggttgtgaaatcaggtgaaggcgaagtgatccgcttgggtgatatcgccaaa
gtgacgttagagaagagccacgacgtttaccgtgccagtgcaaatggacaggaagcggtt
gttgctgccattaacgcagcaccaagtgccaacccaattaacatcgctgcggatgtgctg
gatctgctccctcaattagagcgaaaccttccaagcaacatcaagatgaacgtgatgtac
gactcaaccattgcaatcaacgagtcgattcacgaagttatcaaaactatcattgaagcg
gcagtgatcgtattggtggtgatcacgctattccttggttcattccgagcagtagtgatc
ccaattgttaccattccactctcactgattggtgtggcgatggtgatgcaagggatggga
ttctcttggaacctgatgacactccttgcgatggttctggctatcggcttggtggtggat
gatgccatcgtggtattggaaaacgtggaccgtcacttgaaagaaggcgaatcaccattc
cgtgctgcgatcattggtacacgtgaaattgccgtccctgttatcgcaatgacattaacg
ctgggtgcggtatatgcgccaatcgcattgatgggtggtatcacaggctcactgttcaaa
gagtttgccctaacccttgccggtgcggtattcgtctctggtatcgtggcattaacgctt
tcaccaatgatgtgttcgaaaatgttgaaggcgaatgaaaagccaagcaaattcgagcaa
aaagtgcatcatgtacttgaaggtatgaccaaccgctacgaaggtatgctacgtgccgtc
atggcccatcgccctgtcgtcattgcttttgcactgatcgtattcgcctctctacctgta
ctgtttaagttcatcccaagtgaactggcaccttcagaagataaaggcgtggtggtattg
atgggtacaggcccttcaaatgcgaaccttgattacctacaaaacaccatgaatgatgtg
aacaagattctgtctgatcagccagaagttgagtttgcacaggtgtttactggtgtgcct
aactcaaaccaagcgtttggtctagcaaccctcaagccttggagtcaacgtgaagcaagc
caagctgacgtcactaaacgtgtcggtgacttagtttctgacgtaccaggtatggcggta
acggcattccagatgcctgaattaccaggtgcgggttctggtctaccgatccagttcgtt
gttaccacaccaaacagctttgaaagcttgtacaccatcgcaagcgatatcttgaccgaa
gtgacatccagcccgatgttcgtctactcggatctcgatttgaaatacgactctgcgacg
atgaaaatcaagatcgacaaagacaaagcgggtgcttatggcgtcaccatgcaagacatc
ggtgtgacattgggtaccatgatggctgatggctacgttaaccgtatcgaccttaacggc
cgttcatacgaagtgatcccacaagttgaacgtaagtggcgtctaaaccctgagtcgatg
aagaactactatgttcgcgcagctgatggtaaagccgttcctctgggcagcttgatcacc
attgatgttgttgctgagcctcgctcactgcctcacttcaaccagctcaactctgcaact
gtcggtgccgttcctgcaccgggcacagcgatgggtgatgcgattaactggtttgagaac
attgcggaaaccaaactgcctacgggttacaaccatgactacatgggtgaggctcgtcag
tttgtaactgaaggtagtgcgctatacgctacattcggtcttgcacttgccatcatcttc
ttggtattggcgattcagtttgaatccatccgcgatccaattgttatcatggtttcagta
ccacttgcagtatgtggtgccttgattgcattggcttggggcatggcgacaatgaacatc
tactcgcaagttggtctgatcacccttgtgggcctgatcaccaagcacggtatcttgatc
tgtgaagtcgctaaagaagagcagctccacaacaagctatcgcgtattgatgcggttatg
gaagccgctaaagttcgtctacgtccaatcctaatgaccacagctgcgatgattgcaggt
ctaatcccactgatgtacgcaaccggtgcaggcgctgctcagcgctttagtatcggtatt
gttatcgtggcgggtctagcgattggtaccctattcactctgttcgtactgccagtgatc
tatagctaccttgctgagaaacacaagccactacctgtttttgttgaagacaaagatctg
gaaaagctagcacgtgttgatgaagcaaaagcggcacagcgccaaattgccgaacagcaa
taa
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