Vibrio sp. sp1: H9L11_07040
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Entry
H9L11_07040 CDS
T11103
Symbol
vmeD
Name
(GenBank) multidrug efflux RND transporter permease subunit VmeD
KO
K18138
multidrug efflux pump
Organism
vip Vibrio sp. sp1
Pathway
vip01501
beta-Lactam resistance
vip01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L11_07040 (vmeD)
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L11_07040 (vmeD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vip02000
]
H9L11_07040 (vmeD)
01504 Antimicrobial resistance genes [BR:
vip01504
]
H9L11_07040 (vmeD)
Transporters [BR:
vip02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H9L11_07040 (vmeD)
Antimicrobial resistance genes [BR:
vip01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9L11_07040 (vmeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QRZ23810
LinkDB
All DBs
Position
1:complement(1488884..1492006)
Genome browser
AA seq
1040 aa
AA seq
DB search
MRFTDVFIKRPVLAVSISFLIALLGLQAVFKMQVREYPEMTNTVVTVTTSYYGASANLIQ
GFITQPLEQAVAQADNIDYMTSQSVLGKSTITVNMKLNTDPNAALADILAKTNSVRSQLP
KEAEDPTVTMSTGSTTAVLYIGFTSDELSSSQITDYLERVINPQLFTVNGVSKVDLYGGM
KYALRVWLDPAKMGALKLTATDVMSVLNANNYQSATGQATGEFVLYNGSADTQVSNVAEL
EALVVKTGEGDVIRLGDIAKVTLEKSHDVYRASANGQEAVVAAINAAPSANPINIAADVL
ELLPQLERNLPSNIKMNVMYDSTIAINESIHEVVKTILEAAVIVLVVITLFLGSFRAVII
PIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPF
RAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIIALTL
SPMMCSKMLKANEKPSKFEQKVHHVLDGMTNRYASMLKAIMASRPVVIVFAIIVFASLPV
LFKFIPSELAPSEDKGVVVLIGTAPSNSNLDYIQNTMDDVNKILSDQPEVEYAQVFNGVP
DSNQAFGLATLKPWGEREASQAEIKQRVGGLVSSIPGMSIAAYEMPELPGAGSGLPVQFV
ITTPNNFESLFTVANDILSEVASSPMFVYSDLDLKYDSATMKIKIDKDKAGAYGVTMQDI
GITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMKNYYVRSVDGKAVPLGSLIT
IDVVAEPRSLPHFNQLNSATVGAVTGPGVSMGDAVNWFENIAQTKLPAGYNHDYMGESRQ
FVTEGSALYATFGLALAIIFLVLAIQFESLRDPIVIMVSVPLAICGALIALAWGTASMNI
YSQVGLITLVGLITKHGILICEVAKEEQLHNKRSRIDAVMEAAKVRLRPILMTTAAMIAG
LIPLMYATGAGAAQRFSIGIVIVAGLAIGTLFTLFVLPVIYSYLAEKHKPLPVFVEDKDL
EKLARVDEAKAAHRELADNR
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttacagatgtttttataaaacgtccagttttagcggtatcgatcagctttttg
attgcattgcttggtttgcaagcggtgttcaaaatgcaagttcgtgagtaccctgaaatg
acgaatacggtggtcaccgtgaccaccagttactacggtgcaagtgccaacttgatccaa
ggctttattactcagccattggagcaagcggtggcgcaagccgataatattgattacatg
acttcgcaatcggtactaggtaaatcaaccattactgtcaacatgaagttgaatactgac
ccgaatgcagcattggctgatatcttagcgaaaacgaactcagtacgttctcagcttcca
aaagaagccgaagatccaaccgtaaccatgtcgacaggttcgacaacggcggtactgtac
atcggctttacgagtgacgagttatcttcaagccagatcactgactaccttgagcgtgta
atcaacccgcagttgttcactgtaaacggtgtatccaaagttgacctgtatggtggtatg
aagtacgcactgcgcgtatggctagatcctgccaaaatgggcgctttgaagttgaccgct
acggatgtgatgagcgttcttaacgccaacaactaccaatctgcaaccggtcaagcgacg
ggtgagttcgtactttataacggtagcgcagatactcaggtatcaaacgttgctgaactt
gaagcattggtcgtgaaaactggtgaaggggatgtcatccgcctaggtgatatcgctaaa
gtaacgctagagaagagtcacgacgtttatcgcgcaagtgcaaacggtcaagaggctgtg
gttgcagcgatcaatgcagcgccaagtgctaacccaatcaacattgcagcagacgtactt
gaactgttgcctcagcttgagcgcaacctaccaagtaacatcaaaatgaacgtaatgtac
gactcaactatcgccatcaacgaatcgattcacgaagtagtgaaaacgattcttgaagca
gcagtaatcgtacttgtggttatcacactgttcctgggctcattccgcgcggtaatcatt
cctatcgtgaccattccactttcattgattggtgtggcaatggtgatgcaggcaatgggt
ttctcttggaacttgatgacgctactggcgatggtgcttgccatcggtctggtggtggat
gacgcgatcgttgtactagaaaacgttgaccgtcacatcaaagaaggggaatcgccattc
cgagctgcaattattggtacgcgtgaaattgcggttccagttatcgcgatgacattgacg
ctaggtgcagtgtacgcgccgatcgcgttgatgggtggtatcaccggctcattgttcaaa
gagttcgctttgacactggcaggttcagtattcgtatccggcatcatcgctttgacacta
tcaccaatgatgtgttcgaagatgctgaaggcgaacgagaagccaagcaagtttgagcaa
aaagttcaccatgtacttgatggcatgactaatcgctacgcaagcatgttaaaagcaata
atggctagccgaccagtggtgatcgtgtttgcgataattgtattcgcaagtttaccagtc
ctattcaagtttattcctagcgagctagctccatctgaagataaaggtgttgtagtactc
atagggaccgcaccatcaaattcgaatttggactacatccaaaacaccatggatgatgtg
aataagattctctctgatcaaccagaagtggaatacgctcaggtatttaacggtgtaccg
gattctaaccaagcgtttggtttagctacactcaaaccatggggcgaacgagaagcgagc
caagcagaaatcaaacagcgtgttggcgggcttgtttcgagcattccgggaatgtctatt
gctgcctacgaaatgccggagctaccaggtgctggttcaggccttcctgtacagttcgta
attacaacgccaaacaactttgaaagtttgtttaccgttgcaaatgacattctgtcggaa
gtagcaagcagtccaatgtttgtctattccgatctggatctgaaatatgattctgcaacg
atgaagatcaagatcgataaagacaaagcaggtgcctacggtgtgactatgcaagacatt
ggtatcaccctcagcaccatgatggcagatggttatgtaaaccgtatcgacctaaatggc
cgctcttatgaggtaattcctcaggttgagcgtaaatggcgtctaaacccagaatcgatg
aagaactactatgtacgctctgtggatggtaaagcggttccattaggtagtctgattacc
attgatgtggtggcagagcctcgctctttgccacacttcaaccagctaaactcagcaact
gtgggtgctgttacaggccctggtgtttcgatgggggatgcagttaattggtttgaaaat
attgcacaaaccaaactgcctgcagggtataaccatgattacatgggcgaatctcgtcag
tttgtaacggaaggtagtgccttgtatgcaacctttggtcttgcacttgcgatcatcttc
ctcgttctggcgattcaatttgaatcactccgcgatcctattgtcatcatggtatctgta
cctctggcaatctgtggtgccttgatcgcattggcctggggtacagcctcgatgaacatc
tactcgcaggttggtttgatcacgctggtcggcctaataaccaagcacggtatcttgatc
tgtgaagtcgccaaagaagagcagttacataataaacggtctcgtattgatgcggtgatg
gaagctgcgaaagtgcgtcttcgccctatcctaatgaccactgcagcgatgatcgcaggt
ctgatcccactgatgtacgcaacaggtgcaggtgccgcgcaacgtttcagtatcggtatc
gtcatcgttgctggccttgcaatcggtacactgttcacactattcgtgctacctgtgatt
tacagctacctagctgaaaaacacaaacctctgccagtatttgttgaagacaaagacttg
gagaagttagcgcgagttgacgaagcgaaagcagctcatcgtgaattagcggataacaga
taa
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