Vibrio sp. STUT-A16: VspSTUT16_03120
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Entry
VspSTUT16_03120 CDS
T10420
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vis Vibrio sp. STUT-A16
Pathway
vis00270
Cysteine and methionine metabolism
vis00450
Selenocompound metabolism
vis00670
One carbon pool by folate
vis01100
Metabolic pathways
vis01110
Biosynthesis of secondary metabolites
vis01230
Biosynthesis of amino acids
vis04981
Folate transport and metabolism
Module
vis_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VspSTUT16_03120 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VspSTUT16_03120 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VspSTUT16_03120 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VspSTUT16_03120 (metH)
04980 Cobalamin transport and metabolism
VspSTUT16_03120 (metH)
Enzymes [BR:
vis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
VspSTUT16_03120 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BDR16966
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Position
1:393535..397215
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AA seq
1226 aa
AA seq
DB search
MGSNVRQQIEAQLKQRILLIDGGMGTMIQGYKLEEQDYRGTRFADWHCDLKGNNDLLVLS
QPQLIKEIHAAYLEAGADILETNTFNATTIAMADYEMESLSEEINFAAAKLAREVADEWT
AKTPDKPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIKGGSDLIL
IETIFDTLNAKACSFAVESVFEEMGIELPVMISGTITDASGRTLSGQTTEAFYNSLRHVK
PISFGLNCALGPDELRPYVEELSRISESFVSAHPNAGLPNAFGEYDLSPEDMAKHVQEWA
QSGFLNLIGGCCGTTPEHIRQMALAVENIAPRQLPDLPVACRLSGLEPLAIDKDSLFINV
GERTNVTGSARFKRLIKEELYDEALDVARQQVENGAQIIDINMDEGMLDAQACMVRFLNL
CASEPEISKVPIMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFVEQAKLIRRYGAA
VIVMAFDEIGQADTRERKVEICTNAYRILVDEVGFPPEDIIFDPNIFAIATGIEEHNNYA
VDFIEAVGDIKRDLPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKNGMDMGIVNA
GQLEIYDNVPETLREAVEDVVLNRRDDATERLLDIAAEYAGKGVGKEEDASALEWRTWPV
EKRLEHALVKGITEFIVDDTEEARVNASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVV
KSARVMKQAVAHLEPYINAEKQVGQTNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIID
LGVMVPCEKILKVAQEENVDIIGLSGLITPSLDEMVHVAKEMERLDFNLPLLIGGATTSK
AHTAVKIEQNYKHPVVYVNNASRAVGVCTSLLSDERRPEFVEKLEADYERVRDQHNRKKP
RTKPVTLEAARANKVAIDWEAYTPPVPVKPGIHIFDDFDVAILRQYIDWTPFFMTWSLVG
KYPTIFQHEEVGEEAKRLFEDANELLDRVEREGLLKARGMCGLFPAASVGDDIEVYADET
RTDVVKVLRNLRQQTEKPKGFNYCLSDYIAPKESGKHDWIGAFAVTGGIGERELADEYKA
QGDDYNAIMIQAVADRLAEAFAEYLHERVRKEIWGYAADEDLSNDDLIREKYQGIRPAPG
YPACPEHTEKGPLWELLNVEENIGMTLTSSYAMYPGASVSGWYFSHPDSRYFAIAQIQED
QLESYADRKGWDRIEAEKWLGPNING
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagtaatgtaagacaacagattgaagctcaattgaagcaacgtattcttttgatt
gatggtggtatgggaaccatgattcagggatacaaacttgaagagcaagactatcgagga
acgcgctttgcggattggcattgtgatctaaagggtaacaacgacctgttggttctaagt
cagcctcaacttatcaaggaaattcacgctgcatatttagaagcgggtgcagatattctc
gaaaccaacacgtttaacgcaacaaccattgcgatggctgactacgagatggaaagccta
agtgaagaaattaactttgcagctgccaagcttgcacgtgaagttgcagacgaatggacc
gcaaaaacacccgataaaccgcgttatgtcgcaggggttttagggccgacgaaccggact
tgttctatttctcctgatgtaaatgaccccggatatcgaaatgtttctttcgacgagtta
gttgaggcttactctgaatcgactcgagcgctgattaaaggtggttctgaccttattctt
atcgagaccatcttcgatactcttaacgctaaggcttgttcatttgctgttgaaagtgtg
tttgaagagatgggtattgagttacctgtgatgatctcggggactattactgatgcttct
ggtagaacattatcaggtcaaactacagaagcgttttacaactcattacgtcatgttaaa
ccgatttcgtttggtttgaactgtgcgctgggcccagatgagcttcgtccttatgttgaa
gagctttcgcgtatatcagaatcttttgtttccgctcacccaaatgccgggcttccgaat
gcattcggcgaatacgatttatcgccagaagatatggctaagcatgttcaagagtgggct
caaagtggctttttaaacttgattggtgggtgctgtggtacaactcctgagcacattcgc
caaatggcacttgcggttgaaaatatcgcccctcgtcaattacctgaccttcccgtcgct
tgtcgcttgtctggcctagagccactcgctattgataaagactctttatttatcaatgtc
ggtgagcgtactaatgtaaccggttctgcgcgttttaagcgcttgattaaagaagagctg
tacgatgaagcgctcgatgtggctcgtcaacaagttgaaaatggcgctcaaattatcgat
atcaacatggatgaaggcatgttggatgcacaagcttgtatggttcgatttttaaacctt
tgtgcgtcagaacctgaaatctcaaaagtaccaatcatggtcgactcttccaagtgggag
gttattgaagccggtcttaagtgcatccaaggcaaaggcattgttaactcgatctctctc
aaagaaggcaaagagaaattcgttgaacaagctaagttgattcgccgttatggtgcggct
gtgattgtgatggcatttgatgagatagggcaagcagatacacgtgagcgcaaagtggaa
atttgtaccaacgcttaccgaattctcgttgatgaagtgggctttccaccagaagacatc
atatttgacccaaacatttttgccattgctacgggtatcgaggagcataataactacgcg
gtggatttcattgaagccgttggcgatatcaaacgtgatttaccacacgctatgatctcg
ggtggtgtttctaacgtctcgttctctttccgagggaataactatgttcgtgaggcgatt
catgcggtattcctctaccactgttttaagaatggtatggatatggggatcgtgaatgcg
ggtcagttagaaatctacgataacgtgccggaaacgctgcgtgaggctgtggaagatgtc
gttcttaaccgtcgcgatgatgccactgagaggttgttagatatcgcggcggaatacgca
ggcaaaggggtaggtaaagaggaggatgcctctgcacttgagtggagaacttggcctgtt
gaaaagcgtttagaacacgcgttagtgaaaggaataaccgagtttatcgttgatgatacc
gaagaggctcgtgtcaatgcttcaaagccattagaggtgattgaaggcccactaatggat
gggatgaacgtcgtcggagacttgtttggtgaaggtaaaatgttccttcctcaggtcgta
aaatctgcacgagtgatgaagcaagcagtcgcgcatctggagccctacatcaatgcagaa
aagcaggtgggacaaacaaacggtaagattttgctagcgacggtcaaaggtgatgtacat
gatatcgggaaaaatatcgttggcgttgtattgcagtgcaataactacgaaattatcgat
cttggtgtcatggttccttgcgaaaagatcttaaaagtagcgcaagaagaaaacgtcgat
attattggtttatcagggttgatcacgccttcattagacgaaatggtgcatgttgcaaaa
gagatggagcgtctcgactttaacttacctcttctcatcggtggcgcaacaacgtcaaaa
gcccatacagcagttaagattgagcaaaattacaagcatccagtggtttacgtgaacaac
gcctcacgtgcagtgggcgtatgtacttctctattgtcagatgaacgtcgccctgaattt
gttgaaaaacttgaagctgattacgaacgagtacgtgatcaacataatcgaaagaaaccg
agaaccaaaccagtgacattagaagcggctcgagcgaataaagttgcgatcgattgggaa
gcttatactcctccagtgcctgttaagcctggcattcatatcttcgatgattttgatgtg
gctatattacgtcaatacatcgattggacaccattctttatgacttggtcacttgtgggt
aagtatccaacaattttccaacatgaagaagttggtgaagaagcaaaacgtttattcgaa
gatgccaacgagttacttgatcgagttgagcgagaaggcctgttaaaagcgcgtggaatg
tgtggcttattccctgctgcgagcgtgggggacgacattgaagtttatgctgatgaaact
cgtaccgacgttgtgaaagtattacgtaacttgcgacaacagaccgagaaaccaaaagga
ttcaactattgtttatccgactacatcgcacctaaagagtcgggtaaacatgattggata
ggggcatttgctgtcactggtggtattggtgaacgagagcttgctgatgaatacaaagca
cagggagatgattacaacgcaattatgattcaagcggtggcggatcgcctagccgaagcg
tttgctgagtatttgcatgagcgtgtccgtaaagaaatttggggttatgctgcggatgaa
gatttatctaacgatgatctcattcgtgaaaaataccaaggtattcgccctgcaccaggt
tatccagcgtgccctgagcatactgaaaaaggaccgctttgggagctacttaatgtggaa
gagaatattggcatgactctaacctccagctatgcaatgtatccgggcgcgtcagtctct
ggttggtatttctctcatcctgactcacgttactttgcgatcgcacagatccaagaagat
cagctagagagttacgccgatcgtaaggggtgggataggatcgaggctgaaaaatggtta
gggccaaacattaacggttaa
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