Vitreoscilla sp. C1: ADP71_28300 Help Entry ADP71_28300       CDS       T05336                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism vit  Vitreoscilla sp. C1 Pathway vit03030   DNA replication vit03410   Base excision repair vit03420   Nucleotide excision repair vit03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vit00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     ADP71_28300    03410 Base excision repair     ADP71_28300    03420 Nucleotide excision repair     ADP71_28300    03430 Mismatch repair     ADP71_28300  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vit03032]     ADP71_28300    03400 DNA repair and recombination proteins [BR:vit03400]     ADP71_28300 Enzymes [BR:vit01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      ADP71_28300 DNA replication proteins [BR:vit03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      ADP71_28300 DNA repair and recombination proteins [BR:vit03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      ADP71_28300    NER (nucleotide excision repair)     GGR (global genome repair) factors      ADP71_28300    MMR (mismatch excision repair)     DNA ligase      ADP71_28300   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       ADP71_28300 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia DUF7340 BRCT_2 Motif Other DBs NCBI-ProteinID:  QJQ52424 UniProt:  A0A6M4CAV9 LinkDB All DBs Position complement(2169037..2171445) Genome browser AA seq 802 aa AA seqDB search MNHESIQQQMDELIHLLERYNREYYEQDNPSVSDAEYDAVFLQLQALEVAHPELMRPESP TQRVGGQALSQFDSVVHQVPMLSLNNAFSPIDSQGVYDHSQMQAFDERVKSGLNMDVSPE YFIEPKFDGLALSLIYENGILVQAATRGDGLSGENVTQNVKTIRSIPLKLTTDTPPRLLE VRGEVLMFKADFDALNERQAAEGGKLFANPRNAAAGSLRQLDAKIAAQRPLDFFAYSIAQ LDEAIQPLGHQQELMFLERLGIPTPPSDCCLLSDNMAEINAFYAQMALKRPELPFDIDGM VIKVNDLALQQRLGFVSRAPRFAIAHKFPAEEAPTLVEAIDVQIGRTGAVTPVARLVPVR VGGVTVTNATLHNEGEAQRKDVRVGDTIMVRRAGDVIPEVVRVVFEKRPMQDVPSQSDLF ATESLPQFSRYQLPTACPVCGSDIVKEGDEAIARCTGGMLCQAQRAQALIHFASRTAMDI EGLGSRQIEQLVDLDLVHEFADLYRLDIPTLQRLKQVDDETENNKRETPIKWAQNILAGL EASRAPLLSRFIFALGIRHVGERTAKTLAQYFGQLALIRQMPAPLLACLPDIGEVVAKSI AQYFANTKNQQQLDDLLNVGVAPQENMPHAQLWQVLSMSEWLLHLPDLRMSAKKVAQLLS EAATFDALREQEVSDTAWMTWRSNTANLQLLQHIELALQACQAQTDKLLQDASINETALP VNEAVSGKTFVLTGTLQHKRDEVQAWLEAAGAKVSGSVSKKTDFVVAGDAAGSKLDKANA LGVAVLNEQQLLILLGKSDEKN NT seq 2409 nt NT seq  +upstreamnt  +downstreamnt atgaatcatgaatcaattcaacagcaaatggatgagttgattcatttgctagagcgttat aaccgcgagtattacgagcaagacaatcccagtgtcagtgatgccgagtacgatgcggtg tttttgcaattacaagctttagaagtggcgcatcctgaattgatgcgtcctgaaagcccc acgcaacgtgtgggcggtcaagctttgagtcaatttgacagtgtggtgcatcaagtgccg atgttgagcttgaacaatgctttttctcccatagacagccaaggcgtgtatgaccacagt cagatgcaagcatttgatgagcgggtcaaaagcggcctgaatatggatgtttctcctgag tattttatcgagcctaaattcgatggcttggcgctgagcctgatttacgaaaatggcatt ttggtacaagctgccacgcgtggcgatggtttgagtggtgaaaacgtcactcaaaatgtc aaaaccatacgcagtattcctttaaaactcacgacggatacgccgcctagattgttggaa gtgcgtggcgaagtattgatgttcaaagccgatttcgatgctttgaatgagcgtcaagcg gctgaaggtggcaaattgtttgccaatccacgcaatgcggctgcaggcagtttgcggcaa ttggatgcgaaaattgccgcacaacgaccgttggatttttttgcttacagcattgctcag ttagacgaggcaatacagcctttaggtcaccagcaagaattgatgtttttagagcgtttg ggtattccgacgccaccatcagattgctgtttgctcagcgataatatggctgaaatcaat gcgttttatgcccaaatggcactcaagcgtcctgaattgccttttgatattgatggtatg gtcattaaagtcaatgatttggctttacagcagcgtttgggttttgtttctcgtgcgcct cgttttgccattgcccacaaattccccgcagaagaagcgccgactttggtcgaagccatt gatgtgcaaattggtcgcacaggtgcggtcacgcctgtggcgcgcttggtacctgtgcgt gtgggtggtgtgacggtgaccaatgccacgctacacaatgaaggtgaagcgcagcgcaaa gatgtgcgcgtgggtgacacaatcatggtgcgccgtgcaggggatgtgattcctgaagtg gtgcgggtggtgtttgaaaaacgcccaatgcaagatgtgcctagccaaagtgatttgttt gctactgagtctttgccacaattttcacgttatcagttgccaacagcttgtcctgtgtgt ggcagtgatatcgtcaaagaaggtgatgaagccatcgcacgttgtacgggtggtatgttg tgccaagcgcagcgtgcgcaagcgttgattcattttgcttcacgcacagcgatggacatc gaaggtttgggttcacgtcaaattgagcaattggtggatttggatttggtgcatgaattt gccgatttgtaccgtttggacattccgactttgcagcgtttaaaacaagttgatgatgaa actgaaaacaacaaacgtgaaacgccgattaaatgggcgcagaatattttggcaggttta gaagccagtcgtgcgccattattgtcccgctttatttttgccttaggcatacgccatgtg ggtgaacgtactgccaagactttggcgcaatattttggtcaattggctttgatacgccaa atgcctgcgcctttgttggcgtgtttgcctgatattggtgaagtggttgcaaagagcatt gcgcaatattttgctaataccaaaaatcagcaacagttagatgatttgttaaatgtaggc gtggcgccacaagaaaatatgccgcatgcgcaattgtggcaagttttgagcatgtccgaa tggttgctgcatttgcctgatttgcgcatgagtgccaaaaaagtggcgcaattgttgtca gaagcggcgacatttgatgctttgcgtgagcaagaagtcagcgatacagcatggatgaca tggcgctctaacaccgccaatttgcaattgttacaacacatagagcttgctttacaagct tgtcaggcacaaacagacaaattgttacaggacgcttctatcaacgaaaccgcattgcct gttaatgaagcggtgtccggcaagacttttgtcttaacaggtactttgcaacacaagcgt gatgaagtgcaagcatggttagaggctgcgggtgcgaaagtcagtggcagcgtgtctaag aaaaccgattttgtcgtggcaggtgatgctgcgggcagtaaattagataaggcaaacgct ttgggcgtggccgttttgaatgaacaacaattgttaattttattaggtaaaagtgatgag aaaaattaa

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