Vibrio sp. J383: M4S28_05830
Help
Entry
M4S28_05830 CDS
T11471
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
viz Vibrio sp. J383
Pathway
viz01501
beta-Lactam resistance
viz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
viz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M4S28_05830
01503 Cationic antimicrobial peptide (CAMP) resistance
M4S28_05830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
viz03036
]
M4S28_05830
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
viz02000
]
M4S28_05830
01504 Antimicrobial resistance genes [BR:
viz01504
]
M4S28_05830
Chromosome and associated proteins [BR:
viz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
M4S28_05830
Transporters [BR:
viz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
M4S28_05830
Antimicrobial resistance genes [BR:
viz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M4S28_05830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
RND-MFP_C
BSH_CzcB
Biotin_lipoyl
HH_MFP_RND
BSH_CusB
BSH_YknX
Beta-barrel_RND
BSH_LcnD
HH_EMRA
BSH_YhbJ
HH_AAEA_pHBA
PTS_EIIA_1
NIL
Motif
Other DBs
NCBI-ProteinID:
UQV22468
LinkDB
All DBs
Position
1:1289898..1290974
Genome browser
AA seq
358 aa
AA seq
DB search
MKHKSVLTLLSLSILMASPAALAKRMGPSTVTVVTEQVDIHQVSQSLSLVGKLEAEQSVI
ITSEVAGRVDSINIKANQDVTKGQMLVQLDDDKAKAAVAEAQAYLKDEKRKLAEFQRLVK
RNAITQTEIDAQKTNVEIANARLAAANANLKDLHISAPFSGTVGFIDFSRGKMVTAGTEL
VTLDDLSVMQLDLQIPERYLSKLSKGMTVTARTSAWGETQFTGTVVGIDSRINAETLNLR
VRIHFGNNNDYLKPGMLVAADMDFPPVEAPIIPVQALEYSGTKRFVYVIGEDNKATRTEV
FLGARIDNEVVIDKGIEIGQKIVVQGIVNMRDGVLVQELAVNRPAKLDENTAAQEGAN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataaatctgttttaaccctgcttagcttgtcgattcttatggcgtctccagcc
gcactagctaaacgcatgggtcctagcactgtcactgttgttactgagcaagttgatatt
caccaagttagccaatctctttctttggtaggtaagttagaagcagaacaatctgtgatc
attacctctgaagtagcgggcagagttgactctatcaacatcaaagccaatcaagatgtc
accaaagggcagatgttggttcaattagatgacgacaaagcaaaagctgcagttgcagaa
gcgcaagcgtacttaaaagacgaaaaacgtaagctagcggaattccaacgactagttaaa
cgcaacgcgatcacgcaaactgaaattgacgctcagaaaaccaatgttgaaatcgccaat
gctcgcctagctgccgccaatgccaatcttaaagacttacacatcagcgcgcctttctct
ggcacggtcggttttatcgactttagccgcggaaaaatggtgacagcaggtactgagctt
gtgactttagatgatttgtctgtgatgcagttagatcttcaaattcctgagcgttacctt
tctaagctgtctaaaggcatgacagtgacggctcgcaccagtgcgtggggcgagactcag
ttcactggcacagtggtaggcattgattctcgtattaatgctgaaactttgaaccttcga
gttcgaatccactttggcaacaataatgattacctaaagccgggcatgctagtggcagct
gatatggatttccctcctgtagaagcgccgattatcccagttcaagcgcttgagtattct
ggtactaagcgtttcgtctatgttattggcgaagataacaaagcgactcgtaccgaagtg
ttcttgggtgcgcgtatcgataacgaagttgtgatcgacaagggcatcgagattggccag
aagatcgtggtgcaaggtatcgtgaacatgcgtgacggagtgttggttcaagagctcgcc
gttaatcgcccagctaaacttgatgaaaatacagcagcacaagaaggcgctaactaa
DBGET
integrated database retrieval system
