Varroa jacobsoni: 111265005
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Entry
111265005 CDS
T07417
Name
(RefSeq) telomerase-binding protein EST1A-like isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
vja
Varroa jacobsoni
Pathway
vja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111265005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111265005
03032 DNA replication proteins [BR:
vja03032
]
111265005
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111265005
mRNA cycle factors
Common to processing body (P body) and stress granule
111265005
DNA replication proteins [BR:
vja03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111265005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
DsbD_TM
Motif
Other DBs
NCBI-GeneID:
111265005
NCBI-ProteinID:
XP_022697043
LinkDB
All DBs
Position
Unknown
AA seq
1942 aa
AA seq
DB search
MSIMGDSTEPDGGGTSGGTGRRRRNTKQDRALYQPGKGLGGGSRGSPAPSTGSNQGDRGD
PMDAVQQKLQEMSMRGPPFPGMRRGGRGGRGQGELWRPEKLDNSSNNNHNNRTGGNDSSN
NRGGGGGGGGQQNESTRWKSDRRVSPSDRWRSNGNDESSRTLRGSIKDLTAGTGNGNDGA
GDRGDRSVERARRDSNCSQMSVASSGGPGNSSNGRVSSNWRGRNVAGRNGQNRQQQDNRR
AGGGRNPNNNNNNSVGREDDSGRGPGQDEELSWQKQGVVPPRGNVSGRQLWVDESSEKND
YKAGGSWRSGSQGDNATGRQGEKSCTGSNGNDVNGSDGGKGRRRDSRRERRSRGRGPLER
RRPDDLLDDDTPDQDEEEDPQDADPSHDEAAATEKPLSTAASAEEESFSIQDDRKVASQE
IQEKPNGSESHEQLQESAPKQTETGTQKTQEQSNQLEVALCDANASADPTGEKQVPLQFV
DPEDDDDNELISLQLPGEQENGPVARLDWTECPTPPPLEELESHQEEIQPVYQMDRECGD
RNGRNMSPITRASMVHRGYDDFAGRGNAASYEVDRPHSTQMAQSSDSWIGGRRRLDSDAS
SSFSQYSGRSYNQPGGGRRDRRMSERSAGGGRYDRGSRRDSPSSSRRSPDFNRDRGDKRD
WNRERAESRNSHQSGDQKRYGGFQADTLPPRFLKQREEEMRLQQQQLDRQMLIEQMQRQK
REEKEARERQRKEQVQLLQRQRDQQQIAARERASEQQTSRTKPVEVENWRRRDHLPANSQ
KAKDNVGNDKGDRPQASSASTSPRTMPAVDRHIRNNNNNISNHSSNKSNAAGHNNNAGNS
NGASGGRNLNTNWRSSASGSNMAGSRNPPRDPLPREIWTRNSAAPASAIEKRGSGGTNQR
DDRHRDNRRGDGKDSRLGFDRDSDKNCDSSNSRDGGRGSVKHGRDMKDFQDRDYKDAGGG
QRNAKEIDQRQRDIKGAGGGSNKPLMSVRPVPQVREDARERGGGIHRNLKGAAEKNLAEG
ADLEKELAANLVDAVKVGGGVKRLTELRAKIQRRYEHIILHDPRYSTEKNVEQMLWKSVY
HQVIEGLRRECVDHGGSRASIEIRGEICAIVEEGLTFYESLLEGMQELHGFRLDQSSHTS
LGDSYAGDSNGSRGSKHGPPNSTPVKILLVSAQKMLISLGDLCRYREQALESANFARARD
FYLRAQQLAPKNGKPYNQLALLAVYSRRKLDAVYYYMRSLAASNPFLSAKESLTTLFDEV
RKSCEAIDRQRKIQKGLQDNTRTKAHMALPELARCEIWIRPDGSSWQRRGDSELEQKLEL
LEEINALSDFDLTKRFTLSFLHVHGKLFSKIGMEHFGETAAQMLLELRTLLRRPQTPGAG
ARFLQLLAICMFSIANNSLKSMHTATLASNARSLMQELSVQVAMSLVAHIMEFCTERIEE
HLRCRTSKDPGCYEAAKRDEEHLPVDEQINYPLLPPDVEELLSVLKVWTDWMSGTKMLWC
PPPNPCEFATHTKCGDIWSSLAELLTALMRADSAHVGQMAPEFTTCRTLAQSMEVLLPED
SALAGFVPLLGSPVDTFFAAPVPASQIGALRTALRISRLHFFGDYLCGLTPSPYLHFDVR
RSAYGSLLPEAGDDGGQTEELIAGADDIGLDEEDDEPAYESQTGSDDPSDDDAVVALEGD
DQLGQAGVAGGSGEMEKLRRKKHLLQKRVKRHNRVQAYIERVLHSSRVGTTILEIRPRFL
IPDTNCLVDHLDKVRALVACKTYSIYIPIIVVSELDGLARGCMSNARTHQTPAHAARVTT
FAREALGYLENRFTRREPKLRTITSRGNLIDSISFRTEVGNDLAGVTNDDLILSCAVSLG
KSSASGGELNGGLSLVGGSQTSGAGHSLQPGETEAPLRLFREAVLLTEDRNLAVKAMAHN
VPVRDIVSFVRWAQLPPVDEDI
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatgggagatagtacggaaccagatggtggtgggaccagtggtgggaccggc
cgacgtcgccgtaatacaaaacaggaccgagcactttaccagcctggtaagggattgggc
ggaggcagtcggggatccccggcgccgtcaacaggctctaatcagggagatcgaggcgat
ccaatggatgcagtgcagcagaaacttcaagagatgagtatgcgcggacctccatttccc
ggcatgagaaggggtggtcgtggcggacgtgggcaaggtgagctttggcggccggagaag
ctcgacaatagctccaacaataaccacaataatcgtactggaggcaatgatagtagtaac
aatcgaggaggaggaggaggaggaggagggcagcaaaacgagtcaactcgttggaaatcc
gaccggcgagtaagcccatctgatcgatggaggtcaaatggcaatgatgagtcttcgcgg
acacttcgtgggtctataaaggatcttacggccggcactgggaacggaaatgatggagct
ggtgaccgtggagataggagtgttgaaagggcgcgcagggactcaaactgttcccaaatg
tctgttgcatctagtggaggtcctggaaacagcagcaacggcagggtctcgtccaattgg
agaggaagaaacgttgctggtcggaatggacaaaatcgtcagcagcaagataacagaaga
gcaggaggtggccgaaacccgaataacaataataataacagtgttggaagagaagacgac
agtggacgtggaccaggccaagatgaggagctgagctggcagaaacagggtgtggtgcct
cctaggggtaacgtttctggccgacagctgtgggtggacgaatctagtgagaaaaacgac
tacaaagcaggaggatcatggaggtccggatcacagggtgacaacgctactggccgccaa
ggggaaaagtcatgcactggcagtaatggaaatgatgtgaatggttccgatggcggaaaa
ggccgcagacgagacagccgtcgagagaggcggtcgcgaggtcggggacctctagagaga
cgaagacctgacgatcttcttgatgacgatacaccagatcaagatgaagaagaggacccg
caggacgctgatcctagtcacgatgaagcggctgccaccgagaaaccattaagtactgca
gctagtgctgaagaagagtccttcagcattcaagacgatcgtaaagtggcttctcaggag
attcaagagaagccgaatggcagcgaaagccatgaacagctacaggaaagcgcacccaaa
caaacagagacgggaacccaaaaaactcaagaacagtcgaatcaattagaagttgcactc
tgtgacgctaatgcatcggcggatccgacaggggagaagcaagtcccgctgcagttcgtc
gatcctgaagatgatgatgacaatgagctaatatcgctgcagctcccgggcgaacaagag
aacggtccggtagcccggcttgactggacggaatgtccaacgcccccgccgcttgaagaa
ctcgaaagtcaccaggaagaaatccagcctgtctatcagatggaccgcgaatgtggtgat
cgtaatggccgtaatatgagtccgatcactcgagcaagtatggtccaccgtggatacgat
gacttcgcgggcaggggcaacgcagccagttacgaggtggaccgaccacattctacacaa
atggcacaatcatcagacagttggataggagggcgtcgacgtctggatagtgacgcaagt
agcagcttttcacagtacagtgggagaagctacaatcaacccggtggcggaagacgtgat
cgtagaatgagcgagcgcagcgccggaggtggtcgctacgatcgaggcagcagaagagat
tcgccgtccagttctcgccgaagtccagacttcaatcgagatcgaggagataagcgagac
tggaaccgggagcgagccgaaagtcgaaactcacaccaaagcggcgatcagaaacgttat
ggaggcttccaggccgacacacttccgccgcgtttcctgaagcagcgtgaagaagagatg
agattgcagcagcagcagctggaccgtcagatgctaattgagcagatgcagcgtcaaaag
cgggaagagaaagaggcccgtgaacgccaacgaaaggaacaggttcaactcctccagagg
caacgggatcagcagcagatagcagctcgagagcgggcttcggaacaacaaactagccgc
accaaacctgttgaagtggagaattggaggcgaagagatcacttacctgcaaatagtcaa
aaggcaaaggacaatgtcggcaatgacaagggagacaggccgcaagcatcgtctgcttcg
acatcgcctagaacgatgccagctgttgacaggcatattcgtaacaacaacaacaatatc
agtaatcacagtagcaacaaaagcaacgcggccggtcacaacaacaatgctggcaacagc
aatggagccagtggcggccgaaacctgaacaccaattggagaagttccgcaagtggcagt
aacatggcgggtagcaggaacccgcctcgtgatcctctgcccagagagatttggaccagg
aattcggctgcaccagcatcggcgatagaaaaacgtggctcgggaggaaccaatcagagg
gatgaccgccacagggataacagacgaggcgacggaaaagattcgaggctggggtttgac
agggattcggacaaaaactgcgatagcagcaacagcagagatggcggtagaggttctgta
aaacacggtagggatatgaaggacttccaggatagggactacaaagacgcggggggagga
caacgaaatgcgaaagaaattgaccaacggcagagggacatcaaaggcgcagggggcggc
agtaacaagccattgatgagcgtacggccggttccacaagttagggaagacgctagggag
cgaggaggtggcattcacaggaatctgaaaggagctgctgagaaaaacttggcggaagga
gccgatctagaaaaagaattggctgcgaatttagttgatgcggttaaggtcggtgggggg
gtgaaacgtctaactgaacttcgggctaaaatccagcgacgctatgagcacataattctg
cacgatcctcgatattccaccgaaaagaacgtcgaacagatgctttggaagtcggtgtac
catcaggtaatcgagggactccgtcgtgaatgtgtggaccacggaggttcacgagcgagc
attgagatccgaggcgaaatctgtgcgattgtggaggagggtctaactttctatgagagt
ttgcttgaagggatgcaggaactccatggatttagattagatcaaagttcccacacatcg
ctaggagatagttacgcaggagattctaacggatcccgtggcagtaaacacggtccaccc
aatagcacgccagtcaagatcttgttggtttcagcgcaaaagatgctgattagcctgggc
gatctgtgtcgataccgagagcaggcattggagagtgcgaactttgctcgagccagagac
ttttatctgagagcgcagcagcttgcccctaaaaacggcaaaccctataatcagctcgca
ttactcgctgtctattcgcggcgcaaactggacgccgtttactattacatgcgcagtctg
gctgctagcaatcccttcctctctgcaaaggagtctttaacgaccctcttcgacgaagtg
aggaagagctgcgaggcaatcgatcgacagaggaaaatccaaaaaggtcttcaggataat
accagaacgaaggcgcacatggctcttccagaacttgctaggtgcgaaatttggatcagg
ccagatggatccagctggcagcgtcgcggtgattctgagctcgaacaaaagcttgagctg
cttgaagaaatcaatgcactatctgatttcgatctgacaaagcggttcaccctgtctttc
cttcacgtacacggaaagctattctcgaagatcggaatggaacatttcggagaaactgca
gctcagatgctccttgagctgcgtacactattgcgaagaccgcagacacccggcgccggt
gcacgattcctccaattgctggccatctgcatgttctccattgcaaacaattcgcttaaa
agtatgcatacggctacgctggcgtctaatgcacgttcgctaatgcaggagctatcagtc
caagtggcgatgtcgttggtagctcatataatggagttctgcaccgaacgcattgaagaa
catcttcgctgtcggacctctaaggatcccggttgttacgaggcagctaaaagagatgaa
gagcatcttcccgtagacgagcagattaactacccgttacttccgcccgacgtggaagag
ctgctttcagttttaaaagtctggactgactggatgtcgggtactaagatgctttggtgt
ccaccaccgaatccttgcgaattcgctacacacacaaaatgtggggatatttggtcatct
ttagcggaacttcttaccgcgttaatgcgagcagattcagcgcatgtcggacaaatggca
ccagaattcacaacatgccgaacgctcgcacagtcgatggaggtattgcttccagaagat
tcggcgctcgcaggcttcgtaccacttctcggttctccggtggatacgtttttcgcggca
ccagttccagctagccaaataggagcacttcgaaccgcgctccgaatcagccgattgcac
tttttcggcgactatctgtgcgggctgacaccttcgccttatctgcactttgacgtaaga
aggtcagcgtatggctcgctgttgcccgaagctggggacgatggaggccaaacggaagaa
ttaatcgcaggcgcagacgacattggattagacgaagaagacgatgagcctgcatacgaa
tcgcaaacgggatcagatgatccttcagatgacgacgctgtcgtcgcgcttgaaggtgat
gatcaactcggacaggctggagtcgccggcggaagtggcgagatggagaaactgcgaagg
aaaaagcatctccttcaaaaacgtgtcaaacgacacaaccgtgtgcaagcttatatcgag
cgggtgttgcatagcagtcgagtaggaacaaccatcctggaaattcgaccccgctttcta
atccctgacacaaactgccttgtggatcatctcgataaggtccgcgctctcgtcgcttgt
aaaacgtattctatctatattccgataattgttgtgagtgagctagacggcctggctcgc
ggttgcatgtcaaatgctcggacgcatcaaactccagcacatgccgctcgagtgacaacg
tttgctcgtgaagctctcggttatctggagaaccgatttactcgaagagagccgaaattg
cggacaatcacttcaagaggaaacctaatagactctatttcatttcgcacggaagtcggc
aatgatcttgctggcgtgacaaatgacgatttgattttgtcgtgcgccgtcagcttgggc
aaatcttcagcgagtggtggcgaattgaatggaggtttgtcgctggtaggaggtagtcaa
acatcaggcgcaggccattcccttcaaccgggtgaaacggaggcacccttgcgacttttc
cgtgaggcggttctgctcaccgaagatcgaaacctcgccgtgaaggcaatggcacacaat
gttccagttagggacatcgtcagttttgtccgatgggctcaactaccacctgttgacgag
gatatataa
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integrated database retrieval system
