Varroa jacobsoni: 111266270
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Entry
111266270 CDS
T07417
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vja01009
]
111266270
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vja04040
]
111266270
Protein phosphatases and associated proteins [BR:
vja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111266270
Ion channels [BR:
vja04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111266270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
CPSase_sm_chain
Ank_5
Motif
Other DBs
NCBI-GeneID:
111266270
NCBI-ProteinID:
XP_022699354
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MRRMNLAKKAAYSTVEIVFTDSTYAYWDTMDNPNFRKSIEEQTFPSLGNIRLCPPPQPAL
VIDEMALRRSVIFNEGRLKHEEKLFLDMVKSGDILNLRQLTQNHPDLNVNCLDFRGRGAL
EIAVRCRDPHMVQELLGHPKIETELVYKAVLVAIEENMIDEVSTLLDSPAALRAAAERPS
EYPNILVDNMCPIVQAALLDRLDITKLLLDKGHHIEKPHPRQCKCELRCANADHHEELSE
SQVELNSLRGLASPTYLVLTSPDPILTAFYMSRDLKTEAIERPEFREELLQLSQQCEHFA
AELLDQCQTSEEVQTVLSQTQGFPDSRPFRFPRLYLAILLQQKQFVARPNCQQVLHTLWM
SGIPQWYSWSFYRRFFHIFTQVLFTPLLCLTFLIYPRAKLLHVFRVPMNKFIHHLTLYLI
FLSLILITLFYGRRDQFRFRALWSEVLVGIFVVGYVWELMLSMYTLGFRIFMRSLWSVYQ
LVMFFLFLVAEILYLVVFATSRTIRDNLQRELWPWYHPYLIGEALYAIATVMAFCRLLQL
CQLSKIIGPLSISLNRMTGDIFRFMIILLIVFVAFCAGLNSVYKNYNGNVLRIRGIRNVT
QPAAFVSVGHTLKSLFWGIYAMGSPTDADLVVSQNIGSADRILKHYFTEAVGYGLWALFH
ILTVIVLLNMLIAMMSDSFQRIQENAYQEWMFARASQWIQYFDNHTAIPAPFNLLPSAYC
INQAYKIGMSLWEKEWRRAREQCSPEWACFPDFEQARELQKRYQHNYQSLIIVLIRRYLQ
LRELEERDHALSRVLSSFLSTQDYSSTTPGPPGGTGSNYNSNYNRRDSFGAGQQVKLRHP
SKLAFLGAAFAH
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggatgaacttggccaaaaaagcagcctattcgaccgttgaaatagtatttacc
gattcgacatatgcatattgggacacaatggataaccctaattttcgaaagtcaattgag
gaacagacgtttccttctttgggaaacattcgcttgtgtccgcctccacaaccagctctt
gtcattgatgaaatggcacttcggagaagtgtcatctttaacgagggccgcctgaagcat
gaagaaaaacttttcctggatatggtgaaaagcggcgacatacttaatctacggcagcta
actcagaaccatccagatttaaatgtaaactgtcttgatttccgtggtcgaggagctctt
gaaatagctgtccgctgtcgagatccccacatggtccaggaactgctcggacatcctaaa
atcgaaaccgaactcgtgtataaggctgtactcgtggccatcgaggaaaacatgatcgat
gaggtcagcacgctacttgacagtccggcggccctgcgagcggcagccgaacgaccttca
gaataccctaatattctcgtcgataacatgtgtccgattgttcaagccgccttactagac
agactggacataaccaagttgcttctcgacaagggtcaccacatagaaaaaccgcatcca
cgacaatgtaagtgcgagttacggtgtgcaaatgcagatcatcatgaagagctgtccgaa
tcccaagtcgagcttaactcgttacgaggactcgcgtctcctacttatctggttctcacg
tcaccggacccaatattgacagccttttacatgtcgcgtgacctgaagaccgaagcaata
gagcggccagagttccgcgaggaattgttacaactttctcagcaatgtgaacatttcgca
gctgaactgctcgatcagtgccaaacatccgaggaggtacaaacagttctatcacaaact
caaggttttccggattcaaggccatttcgtttccctcggctctatcttgccattttattg
caacagaaacagtttgtggccaggccaaactgccaacaagttctgcacacattgtggatg
tccggtataccacaatggtattcctggtcattctatagacgctttttccacatcttcacg
caggtgctttttaccccccttctctgtctcacttttctcatctatcctcgagctaagctt
ctgcacgtattccgtgtacccatgaataagtttatccaccatttgacactgtatctgatc
tttctatcgctaattctcatcacgctattctatggtcgtcgagaccaatttcggtttcgc
gcgctctggagtgaagttctcgtaggcatatttgtcgtcggctacgtgtgggaactaatg
ctcagcatgtacacgttgggctttcgaatattcatgcgctctctatggtcggtttaccag
ctggtgatgttctttctctttctggttgcggaaattctttaccttgttgtgtttgcgacc
tcccgaacgattcgcgacaaccttcaacgtgagctttggccatggtatcacccgtacctc
attggtgaggcattgtacgcaattgccacagtgatggcattttgtcgattgcttcaactg
tgtcagttaagcaaaattatcgggccactgagtatttcgttgaatcggatgactggagac
atcttccgttttatgatcatcctgcttatcgtcttcgtagctttttgcgccgggctgaat
tcagtctacaagaactacaacggcaacgtacttcgcattcggggtattcgaaatgtgaca
caaccagcggcattcgtcagcgtcggtcatactttgaagtccctgttttggggaatatac
gcgatgggttctccgacagacgcagacctagtggtttctcaaaacatcgggagtgccgac
cgtatcctcaagcactacttcactgaagcagtcggttacggactttgggcactgtttcac
attctgacagtaatcgtattactcaacatgcttattgccatgatgtctgatagcttccag
cgtattcaggaaaatgcgtatcaggagtggatgtttgctagggcatctcaatggatccag
tactttgataatcatacggctattccagcacctttcaatcttttgccatcggcctactgt
atcaatcaggcatacaaaattgggatgtcactctgggaaaaggaatggcgacgagcacgt
gaacagtgctctcctgagtgggcttgttttcctgattttgagcaggctagagagcttcaa
aagcggtaccaacataattatcaaagtcttatcatcgttcttattcgacgttatctccag
ttacgtgagctcgaagaacgggatcacgcattatcaagagttctgtcatcatttctttcg
acgcaggattattcgtccaccacacccggcccacctgggggcacgggcagcaattacaat
tcgaattacaatcgacgtgattcatttggagctggtcaacaggttaaactgaggcaccct
tccaaactggcttttttaggggcggcattcgcacactaa
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