Varanus komodoensis (Komodo dragon): 123017378
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Entry
123017378 CDS
T07701
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123017378 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123017378 (EFTUD2)
Spliceosome [BR:
vko03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123017378 (EFTUD2)
Complex C
U5 SnRNP specific factors
123017378 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
Motif
Other DBs
NCBI-GeneID:
123017378
NCBI-ProteinID:
XP_044274630
Ensembl:
ENSVKKG00000016125
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDDDDDEIGRDTKDLDELDDDDDDEMGDHDEDHPGMDVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLAD
LMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGI
KSTPVTIVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTER
LIKHAVQEKLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLILS
PLLGNVCFASSQYSICFTLGSFAKIYTDMYGDINYQEFAKRLWGDIYFNPKTRKFTKKAP
TSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCK
KFFGEFTGFVDMCVQHIPSPKAGAKTKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKM
YSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEV
NRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREGPLCD
ELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacctgtatgatgagtttgggaattacattggcccagagcttgattctgat
gatgatgatgatgaaataggtcgggatacaaaggatcttgatgagcttgatgacgatgat
gatgatgagatgggagaccatgatgaagaccatcctgggatggatgtggtactgcatgag
gataaaaaatattatcccactgctgaggaagtctatggtccagaggtagagactatagta
caggaggaagacacgcagccactgacagaacctattattaagccagtaaagacaaagaaa
ttctctcttatggagcaaacactgccagtcaccgtgtatgagatggacttcctagcagac
ttgatggacaactcggaactgatccggaatgttacactttgtggtcacctacaccatggc
aagacttgctttgtggattgcctgattgagcagacccatcctgagatcagaaagcggtac
gaccaggatctttgctatacagatatactattcactgaacaagagaggggagttgggatc
aagagcacaccagtgaccattgttctcccagacacaaagggcaaatcttttctcttcaat
atcatggacacacccggtcatgtgaatttctctgacgaggtcacagcaggtcttcgcatt
tctgatggcgttgtactcttcattgatgctgctgagggggtcatgctcaacactgagcgg
ttgatcaagcatgcagtgcaggagaagttggcagtgactgtgtgcattaacaagattgac
cgcctgatactggaactgaagctacctcctacggatgcctattacaagctgcgacacatc
gtggatgaagtcaacggcttaatcagcatgtattccacagatgagaacctgatcctctcc
ccactcctgggcaatgtctgttttgcaagctcccagtatagcatctgtttcacgctgggt
tcctttgcgaagatctacactgacatgtatggagacatcaattatcaggagtttgccaag
cggctttggggagacatctacttcaatcccaagacgagaaagttcacaaaaaaggcccca
accagcagctcccagaggagctttgtggaattcatccttgagcctctctacaagatcctg
gctcaggtggttggagatgtagacaccactctgccccgaactctggatgaactgggaatc
catctaaccaaagaagagctgaaactcaacatccgtcccctcctgaggcttgtctgcaag
aaattttttggggagttcacaggctttgtggacatgtgcgtgcagcatattccttctcca
aaagcaggagcaaagaccaagattgagcacacatacacaggtggagtggactctgacctg
ggggaggccatgagtgactgtgaccctgatggtccgctaatgtgccataccaccaagatg
tacagtacagatgatggagtccagttccatgcatttggccgggtgctgagtgggaccatc
catgcagggcagcctgtcaaggtccttggagaaaactacaccctggaagatgaagaggac
tcacagatttgtactgtggggcgcctctggatctctgtagcacggtaccacatagaagtc
aacagggtccctgctggcaactgggtgcttattgagggagtggaccagcctatcgtgaag
acggccacaatcactgagccccggggcaatgaagaggcccagatattccgtcccttgaaa
ttcaacaccacatctgtaatcaaaatagctgtggaacctgtaaatccctctgagctaccc
aagatgctggatggtctgcggaaagtcaataaaagctacccatctctcactaccaaggtg
gaagaatctggggagcatgtgatcttgggtacaggcgaactgtatcttgactgtgtaatg
catgacctgcggaaaatgtactccgagattgacattaaggtggctgatcctgttgtcaca
ttctgtgaaacagtggtggaaacatcttccttgaagtgttttgctgagacacccaataag
aaaaacaagatcacaatgattgctgagcctctggaaaagggtctggctgaagacattgag
aatgaagtggtacagataacatggaacaggaaaaagctgggtgagtttttccagaccaag
tatgactgggatttgctggctgcccgatctatctgggcttttgggccagatgctactgga
ccaaacatcttggtggatgatactctcccttcagaggtcgataaaaccctcttgggctct
gtgaaggacagcattgtgcagggcttccagtggggaaccagggaagggcccctctgtgat
gagttgatccgcaatgtgaagttcaagatcctggatgctgtgattgcccaggaaccgttg
catcggggaggcggacaaatcattcccacagccaggcgtgtagtgtattctgccttcctc
atggccactccacgcttaatggagccatattactttgtggaggttcaggcacctgctgac
tgcgtgtctgcagtatacacggtcctggccaggcgtagaggccatgtcacccaagacgca
cccatcccaggctcccctctgtacaccatcaaagccttcatcccagccattgactcattc
ggatttgagacagacctcaggacacacacacagggacaagcgttctcactctctgtcttc
catcactggcaaattgtgccaggtgaccccttggacaagagcattgtgattcgacctctt
gagcctcagccagcccctcatctggccagagagtttatgatcaagaccaggcgcaggaag
ggactaagtgaggatgtgagcatcagcaagttcttcgatgaccctatgttgctggagctg
gccaaacaggatgttgtgctaaactatcccatgtga
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