KEGG   Varanus komodoensis (Komodo dragon): 123017378
Entry
123017378         CDS       T07701                                 
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
vko  Varanus komodoensis (Komodo dragon)
Pathway
vko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123017378 (EFTUD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vko03041]
    123017378 (EFTUD2)
Spliceosome [BR:vko03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    123017378 (EFTUD2)
 Complex C
   U5 SnRNP specific factors
    123017378 (EFTUD2)
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_C EFG_IV GTP_EFTU_D2 EFG_III
Other DBs
NCBI-GeneID: 123017378
NCBI-ProteinID: XP_044274630
Ensembl: ENSVKKG00000016125
LinkDB
Position
Unknown
AA seq 971 aa
MDADLYDEFGNYIGPELDSDDDDDEIGRDTKDLDELDDDDDDEMGDHDEDHPGMDVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLAD
LMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGI
KSTPVTIVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTER
LIKHAVQEKLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLILS
PLLGNVCFASSQYSICFTLGSFAKIYTDMYGDINYQEFAKRLWGDIYFNPKTRKFTKKAP
TSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCK
KFFGEFTGFVDMCVQHIPSPKAGAKTKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKM
YSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEV
NRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREGPLCD
ELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggatgcagacctgtatgatgagtttgggaattacattggcccagagcttgattctgat
gatgatgatgatgaaataggtcgggatacaaaggatcttgatgagcttgatgacgatgat
gatgatgagatgggagaccatgatgaagaccatcctgggatggatgtggtactgcatgag
gataaaaaatattatcccactgctgaggaagtctatggtccagaggtagagactatagta
caggaggaagacacgcagccactgacagaacctattattaagccagtaaagacaaagaaa
ttctctcttatggagcaaacactgccagtcaccgtgtatgagatggacttcctagcagac
ttgatggacaactcggaactgatccggaatgttacactttgtggtcacctacaccatggc
aagacttgctttgtggattgcctgattgagcagacccatcctgagatcagaaagcggtac
gaccaggatctttgctatacagatatactattcactgaacaagagaggggagttgggatc
aagagcacaccagtgaccattgttctcccagacacaaagggcaaatcttttctcttcaat
atcatggacacacccggtcatgtgaatttctctgacgaggtcacagcaggtcttcgcatt
tctgatggcgttgtactcttcattgatgctgctgagggggtcatgctcaacactgagcgg
ttgatcaagcatgcagtgcaggagaagttggcagtgactgtgtgcattaacaagattgac
cgcctgatactggaactgaagctacctcctacggatgcctattacaagctgcgacacatc
gtggatgaagtcaacggcttaatcagcatgtattccacagatgagaacctgatcctctcc
ccactcctgggcaatgtctgttttgcaagctcccagtatagcatctgtttcacgctgggt
tcctttgcgaagatctacactgacatgtatggagacatcaattatcaggagtttgccaag
cggctttggggagacatctacttcaatcccaagacgagaaagttcacaaaaaaggcccca
accagcagctcccagaggagctttgtggaattcatccttgagcctctctacaagatcctg
gctcaggtggttggagatgtagacaccactctgccccgaactctggatgaactgggaatc
catctaaccaaagaagagctgaaactcaacatccgtcccctcctgaggcttgtctgcaag
aaattttttggggagttcacaggctttgtggacatgtgcgtgcagcatattccttctcca
aaagcaggagcaaagaccaagattgagcacacatacacaggtggagtggactctgacctg
ggggaggccatgagtgactgtgaccctgatggtccgctaatgtgccataccaccaagatg
tacagtacagatgatggagtccagttccatgcatttggccgggtgctgagtgggaccatc
catgcagggcagcctgtcaaggtccttggagaaaactacaccctggaagatgaagaggac
tcacagatttgtactgtggggcgcctctggatctctgtagcacggtaccacatagaagtc
aacagggtccctgctggcaactgggtgcttattgagggagtggaccagcctatcgtgaag
acggccacaatcactgagccccggggcaatgaagaggcccagatattccgtcccttgaaa
ttcaacaccacatctgtaatcaaaatagctgtggaacctgtaaatccctctgagctaccc
aagatgctggatggtctgcggaaagtcaataaaagctacccatctctcactaccaaggtg
gaagaatctggggagcatgtgatcttgggtacaggcgaactgtatcttgactgtgtaatg
catgacctgcggaaaatgtactccgagattgacattaaggtggctgatcctgttgtcaca
ttctgtgaaacagtggtggaaacatcttccttgaagtgttttgctgagacacccaataag
aaaaacaagatcacaatgattgctgagcctctggaaaagggtctggctgaagacattgag
aatgaagtggtacagataacatggaacaggaaaaagctgggtgagtttttccagaccaag
tatgactgggatttgctggctgcccgatctatctgggcttttgggccagatgctactgga
ccaaacatcttggtggatgatactctcccttcagaggtcgataaaaccctcttgggctct
gtgaaggacagcattgtgcagggcttccagtggggaaccagggaagggcccctctgtgat
gagttgatccgcaatgtgaagttcaagatcctggatgctgtgattgcccaggaaccgttg
catcggggaggcggacaaatcattcccacagccaggcgtgtagtgtattctgccttcctc
atggccactccacgcttaatggagccatattactttgtggaggttcaggcacctgctgac
tgcgtgtctgcagtatacacggtcctggccaggcgtagaggccatgtcacccaagacgca
cccatcccaggctcccctctgtacaccatcaaagccttcatcccagccattgactcattc
ggatttgagacagacctcaggacacacacacagggacaagcgttctcactctctgtcttc
catcactggcaaattgtgccaggtgaccccttggacaagagcattgtgattcgacctctt
gagcctcagccagcccctcatctggccagagagtttatgatcaagaccaggcgcaggaag
ggactaagtgaggatgtgagcatcagcaagttcttcgatgaccctatgttgctggagctg
gccaaacaggatgttgtgctaaactatcccatgtga

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