Varanus komodoensis (Komodo dragon): 123027328
Help
Entry
123027328 CDS
T07701
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123027328 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vko03000
]
123027328 (KDM2A)
04121 Ubiquitin system [BR:
vko04121
]
123027328 (KDM2A)
03036 Chromosome and associated proteins [BR:
vko03036
]
123027328 (KDM2A)
Enzymes [BR:
vko01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
123027328 (KDM2A)
Transcription factors [BR:
vko03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123027328 (KDM2A)
Ubiquitin system [BR:
vko04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123027328 (KDM2A)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
123027328 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
123027328 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Cupin_1
Motif
Other DBs
NCBI-GeneID:
123027328
NCBI-ProteinID:
XP_044293946
Ensembl:
ENSVKKG00000017048
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MAAEYVKGQRKTRDLEEEEEDSSSDISFSLSSEESEMEPEEERIRYSKRLRGAMRRRYED
DGISDDEIEGKRTFDLEEKLCTNKFNANFVVFMEGKDFTVEYIQRGGLRDPLIFKSCDGL
GIKMPDPDFSVNDVRLYVGSRRMVDVMDVNTQRDIEMTMAQWARYYETPEEEREKLYNVI
SLEFSHTRLENLVQRPTTVDLIDWVDNMWPRHLKESQTESTNAILDMQYPKVQKYCLMSV
KGCYTDFHVDFGGTSVWYHIHRGGKVFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVSN
CQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNKF
RYPFYYEMCWYVLERYVYCITNRSHLTKDFQKESLSMDMELCSSESGNVDEDDATAGKES
RRPVTRRSVLTSPMANGANLDYEELGRGCRSLPGLKRTLSMDSESSRGSHNGQAWDSHSS
SPHKGRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKLLLEEYANSD
PKLALTGIPIVQWPKRDKLKLQTRPKLRLPAIPITKPHTMKPAPRPATVRPTVSPIVSGA
RRRRVRCRKCKACLQGECGLCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCALCG
EVDKNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKCYKGDEAEKG
QKRKMDDGDDDTVQAKVLRPLRSCEEALTPPPHSPTPMLQLIHDPVSPRSIVTRSSPGAG
PSDHHGASRDERFKRRQLLRLQGTERTVVREKENNPSGKKELSEVEKAKLHGSYLTVTLQ
RPTKDVHGTSIVPKLQAITASTNMRHSPRVVMRQSSARTPQRGGDEEAAEEEEEDESADE
EDESAEESGAARLNGQGGRAPDGEELWMQKEVWMSVFRYLTRKELCECMRVCKTWYKWCG
DRRLWTKIDLSRYKSITPLALGGIIRRQPVSLDLSWTNISRKQLTWLINRLPGLKDLILA
GCSWSAVSALSTSTCPLLRTLDLRWAVGIKDPQIRDLLTPPSDKPSQDNRSKLRNMIDFR
LAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSTNLLTAVGSSTRNSLTEINMAGCN
KLTDQSLLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagtatgtaaaggggcaaaggaaaactagagacctggaggaagaggaggaa
gacagcagttcagatatctccttctcactctcatcagaagagtctgagatggagcctgaa
gaagaacggatccgttatagtaaaagactgcgtggtgctatgagacggcgttatgaagat
gatggcatctcagatgatgaaattgagggcaaacgaacatttgatcttgaagaaaaactt
tgcaccaacaaatttaatgccaactttgtggtgtttatggaaggcaaagatttcactgta
gaatacattcagcgtggtggcttaagagaccctttgatcttcaaaagctgtgatggactt
ggaataaagatgccagatccagacttcagtgtgaatgatgtacggctctatgtggggagt
cggaggatggtggatgtcatggatgtgaacacacaaagggacattgagatgaccatggca
cagtgggcacgctactatgaaactccagaggaggagcgtgagaagctatataatgtcatc
agcctagaattcagccatacacggcttgagaacctggtgcagagaccaactacggtggat
ttgattgactgggtcgataacatgtggccaaggcatctgaaagaaagccagacagaatca
acaaatgctattctggacatgcagtatcccaaagtgcagaagtactgtctgatgagtgtc
aagggctgctatacagacttccatgtagacttcggtggcacttcagtatggtatcatatc
cacagaggagggaaggtcttctggttaattccacccacaccccagaacctggagctgtat
gaaaactggctgctttcagggaaacaaggtgacatctttcttggtgacagggtgtcaaac
tgtcaacgaattgaactgaagcaaggctatacttttgtcataccctcaggttggatccat
gcggtgtatacccctatggacactttggtttttggtggtaactttctacacagcttcaac
atccctatgcagttgcggatctatagtattgaagaccgcacacgggtcccaaataagttt
cgctatcccttctattatgaaatgtgctggtatgtcctggaacgctatgtctactgcatt
acaaaccgttcccacttgaccaaggactttcagaaggagtcactcagtatggatatggag
ctgtgcagctcggagtcaggaaatgtggatgaagatgatgcaacagcagggaaagaatca
cgccgcccagtcaccagacgatcagtcctcaccagccctatggccaatggtgctaatcta
gactatgaagaactaggtagaggttgccggagtttgccaggtctcaagagaactctctcc
atggactctgagtccagccgaggctctcacaatggccaagcttgggactcacatagcagc
agccctcataaaggcaggaaggtgcacctgacacaatttgaacttgagggtctacgctgt
ctggtagacaagctggagtctttgcctttacacaagaagtgtgtacccacaggcatagag
gatgaggatgcccttatcgcagatgttaagctactgctggaggagtacgcaaacagtgat
cccaaactggcacttactggaatccctattgtccagtggccgaagagggataagctcaaa
cttcagactcggccaaagttaagattacctgcaatccctatcaccaagcctcataccatg
aaaccagctccacggcctgcaacagtgagacccacagtctctcctatagtctctggtgca
cgcagaaggcgggtgcgatgtcgcaaatgcaaggcttgcctgcagggtgaatgtggcctg
tgtcactactgcagggacatgaaaaagtttggagggcctggtcgcatgaagcagtcctgt
gtactacgacagtgcttggcgcccagactgcctcactctgtcacatgtgcactttgtggg
gaggtagataagaatgaggattcacaagactttgagaagaagctaatggaatgctgcatc
tgcaacgagattgttcaccctggctgtctacagatggacggggaagggctactgaatgat
gagttgcccaactgttgggagtgtccaaagtgctacaagggtgatgaggcagaaaaaggc
cagaagcggaaaatggatgatggcgatgatgacacagtccaagccaaagtcctgcgacct
ttacgaagctgtgaggaagctctgactccaccaccacattcacctaccccaatgctgcag
ttaatccatgaccctgtgtcaccacgaagcatagtaacacggtcttctccaggggcaggt
cctagtgaccatcatggtgccagtcgagatgaacgctttaagaggcgtcagctgcttcgt
ttgcaaggcacagagcgcacagtggtgcgggaaaaagagaacaaccctagtggcaagaaa
gagctttcagaggtagaaaaggccaagctccatggttcttaccttacagtcacattgcaa
agacctaccaaagacgtgcatggcacttccattgtgcccaagctgcaggcgatcactgcc
tccactaacatgcggcactctccccgtgtggtcatgcgccaaagttcagccaggacaccc
cagcggggtggagatgaggaggcagctgaggaagaagaggaggatgaaagtgcagatgag
gaagatgagagtgccgaggagagtggggcagccagactgaatggccaggggggaagggca
ccagatggtgaggagctctggatgcaaaaggaggtgtggatgtctgtcttccgctatctc
actcgcaaggagctttgtgaatgtatgcgtgtatgcaaaacctggtacaaatggtgtggt
gatagaagattgtggacaaagatagacttgagtaggtacaagtccatcacacccctggct
cttggtggcataatcaggaggcagccagtcagccttgacctcagttggaccaatatttcc
agaaagcagctcacctggctcatcaacagactaccaggcctcaaagacctcatcttggca
ggctgctcatggtcggcagtatctgccctaagtacctccacctgcccccttctcaggacc
ctcgatcttcggtgggcagtaggaatcaaggatcctcagattcgggacttgctcacaccc
ccatcagataaacccagtcaggacaatcgcagtaaactccgtaacatgatagacttccgg
ttggctgggctggacattactgatgccacactccggctcatcatccgccacatgcctctc
ctctcccgacttgatcttagtcattgcaatcaccttacagatcagtcgaccaacttgtta
acagctgtgggatcttctacacgaaactcactcactgaaatcaatatggcaggctgcaat
aagctcacagaccagtccctgctgtacctgcgccgcatttctaatgtcaccctgatagac
cttcgtggctgcaagcagatcacccgcaaggcctgcgagcacttcatctcagacctgtca
atcaacagcctctattgcctgtctgatgaaaagctgattcagaaaatcagctag
DBGET
integrated database retrieval system
