Varanus komodoensis (Komodo dragon): 123027875
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Entry
123027875 CDS
T07701
Symbol
DHX9
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123027875 (DHX9)
03012 Translation factors [BR:
vko03012
]
123027875 (DHX9)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123027875 (DHX9)
5.6.2.6 RNA 3'-5' helicase
123027875 (DHX9)
Spliceosome [BR:
vko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123027875 (DHX9)
Translation factors [BR:
vko03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123027875 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
nSTAND3
ResIII
AAA_19
Dicer_dimer
partial_CstF
ATPase
AAA_14
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
123027875
NCBI-ProteinID:
XP_044295102
Ensembl:
ENSVKKG00000004772
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MGDVKNFLYAWCGKRKVTPAYEIRAVGNKNRQKFTCEVRVTGFNYIGMGNSTNKKDAQTN
AARDFLNYLVRVNEIKSEEIPAFGAGAVGAPGGGVTGAEDGTDGLDAPFGGPLPPHLALK
SEEVDDAVPPGIGSSGYGGAQWDRGANLKDYYSRKEEQEAQATLESEEVDLNAGLHGNWT
LENAKARLNQFFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYVKQLARRIFAREHGSNKKL
AAQSCALSLVRQLYHLNVIEAYSGQTKKKEGESVEPYEVTVSTDLESRLQKIVEEMSLQT
VPPPEDPSLPAVLNIGKLAHFEPSQKQNQMGVVPWSPPQSNWNPWTSCNIDEGPLAYATP
EQISMDLKSNLMYQLENDQELQKILQERDTLPVKKFEQEILEAIHQNSVVIIRGATGCGK
TTQVPQYILDEYIHSGRAAECSIVVTQPRRISAVSVAERVSYERGEEPGSSCGYSVRFES
VLPRPHASVMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEV
RIILMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTKFIPPPKDKKKKDKD
EEGGDDDDANCNLICGDEYGPETKHRMAQLNEKETPFELIEALLKYIETLNVPGAVLVFL
PGWNLIYTMQKYLEMNSHFGTQRYRILPLHSQIPREEQRKVFDPVPPGMTKVILSTNIAE
TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC
SRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR
ELDALDSNDELTPLGRILARLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFISEG
KRLGYVHRNFAGNRFSDHVALLSVFQAWDHARMGGENAEIRFCEHKRLNMATLRMTWEAK
VQLKDILVNSGFPEECLMTQVFNNMGPDNSLDVVISLLAFGLYPNVCFHKEKRKILTTEG
RNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKAMTLVSPLQLLLFGSKKVVS
DGEIIMLDDWIKLRMPHKVASCITALRAAMEALVVEVTKNPDIISDIDPLNKQMLDVICE
LSKPLAAGISLTTGNMRFGDGPRPPKMARYDNGGGYRGRGSGYRGGYGSGYRGGYRSGYG
GGYNSYRGSFGGRGYSGAPGGGGFRGAGGFRGSGGGYQSGGNRGGGFTEDGRGRGGY
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgtgaaaaatttcttgtatgcctggtgtggaaagcggaaagtgaccccagct
tatgaaatccgcgctgtgggtaacaagaaccggcagaagttcacatgtgaggttcgagtg
acaggcttcaactatattggcatgggcaactctaccaacaagaaggatgcccagaccaat
gccgcgagagacttccttaactatcttgttcgagtgaatgaaatcaagagtgaagaaatt
ccagcttttggagcaggagctgtgggtgcacctggtggaggtgtgactggggcagaagat
ggtacagatggattggatgctccttttggagggcctcttccacctcatctggctcttaaa
tcagaagaggtagatgatgctgttcctccagggattggaagctccggctatggtggagct
cagtgggaccgtggagctaatcttaaagattactattccaggaaggaggagcaggaggcc
caggcaaccttggagtcagaagaagtagatttaaatgctggccttcatggaaactggacc
ttggaaaatgccaaggcacgcttgaaccagtttttccaaaaggagaagatccaaggagaa
tataaatatactcaagtgggacctgatcataacaggagttttattgcagaaatgaccatt
tatgttaagcagctggccagaagaatctttgctcgtgaacacgggtcaaataaaaagctg
gctgcacaatcttgtgctctgtctctggtcaggcagctctatcacctgaatgtcattgag
gcttactctgggcaaaccaagaaaaaggaaggggaatcggtggagccttatgaagtcact
gtctccactgatttggaaagtcgattgcagaaaattgtagaagagatgagtcttcaaact
gttccacctcctgaagatcccagcctccccgctgtgctcaacattggaaagctggctcac
tttgagccatcccagaagcagaaccaaatgggggttgtgccatggtcgccccctcagtcc
aactggaatccgtggaccagctgcaatattgatgagggtcctctagcatacgccacgcca
gagcagataagcatggacctaaaaagcaacctcatgtatcagctggaaaatgaccaagag
ctgcagaaaattcttcaagagagggacaccttgcctgtgaagaagtttgagcaagagatt
ctagaagccatccatcagaactctgttgtcatcatccgtggggccacaggttgtggtaaa
accacacaggttccacagtacatcctggacgaatacatccacagtggaagagcggctgaa
tgtagcatagtggtgactcagcccaggaggatcagtgctgtttctgtggctgaacgagtc
tcctacgagagaggagaagaacctgggagtagctgtggctacagcgtccgctttgaatct
gtgcttccccgtccccatgccagtgtgatgttctgcactgtaggagtcctcctgagaaag
ctggaagctggtatccgaggcatcagtcatgttattgtggatgaaatccatgagagagat
attaatacggatttcctgttggtggttctgcgagatgtagtccaggcctacccggaagtc
agaatcatccttatgtctgccaccattgataccagcatgttctgtgaatacttcttcaat
tgccccatcatcgaagtctatggcagaaccttcccagttcaggagtattttctggaagac
tgcattcagatgactaaattcattcctccaccaaaggacaagaagaagaaagataaggat
gaagaaggtggagatgatgatgatgccaattgcaaccttatctgtggtgatgaatatggc
ccagaaacaaaacaccggatggcccagttgaatgagaaggaaaccccctttgagctcata
gaggccttgttgaagtacattgagactctgaatgtaccaggagctgtccttgtctttttg
cctggctggaatctgatctacaccatgcagaaatacctggaaatgaattcacacttcgga
acccagcggtacagaattcttcctctgcattcccagattcccagagaggaacagcgcaaa
gtatttgacccagtgcctcctggcatgaccaaggtaattttatccaccaatattgctgag
accagtattaccatcaatgatgttgtctacgtgattgattcttgcaaacaaaaggtgaaa
ttgtttactgcgcacaacaacatgaccaactatgctactgtgtgggcctccaaaacgaac
ttggagcagcgaaaaggacgagctggtcgtgtccgccctggattctgtttccatctctgc
agcagagctcgctttgagaggcttgagacgcatatgacccctgagatgtttcgaaccccc
ctacatgaaatcgctttgagcatcaaactgctacgattgggagggattggacagttcctg
gccaaagcgatcgagccgccccctttggatgctgtgatcgaggcggagcacacactcaga
gagctcgatgcgctggactccaatgatgaactgacacctctcgggcgaatcttagcgagg
cttcccattgaacctcgccttggaaagatgatgataatgggatgtattttctatgtggga
gatgctgtatgtaccatctctgcagccacctgttttcctgagccgttcatcagtgaggga
aagaggctgggttatgtccaccggaattttgctggaaaccgattttctgatcatgtggcc
ctactctcagtgttccaggcctgggatcacgccagaatgggtggagaaaatgcagaaata
cgtttctgtgagcacaagagactcaacatggcaacactcagaatgacctgggaagccaaa
gtgcaattgaaagatattcttgtaaactctggattcccagaagagtgtttgatgacgcaa
gtatttaataacatgggaccagataacagtctggatgttgttatttctctcctggccttt
ggcttatatcccaatgtctgctttcacaaggagaagaggaagattctaaccactgagggg
cgcaatgccctcattcataaatcatctgttaactgcccattcagcagtcaggacatgaaa
tacccttctccattctttgtgttcggagaaaagatccggacacgagccatctctgccaaa
gcaatgactttagtgagccctttgcagctgcttctctttggctcaaagaaagttgtatct
gatggagagattattatgttggatgactggatcaaactacggatgcctcataaggtagct
tcctgtatcactgccttgcgtgcagcaatggaagcccttgtggtagaagtaactaaaaat
ccagatatcatcagtgacatagaccctctgaacaaacagatgctggatgtaatttgtgag
ctctccaagccattggctgctggcatcagcctcacaacaggaaacatgagatttggagat
ggacctcgtccacccaaaatggctcgctacgacaatggaggtggctacagaggaagaggt
agtggatacaggggtggatatggaagtggatacagaggtggatacagaagtgggtatgga
ggagggtataattcttatcgtggcagctttggaggaaggggatactcaggtgctccagga
ggtggtggttttcgaggtgctggaggttttcgaggttcaggtggaggataccaaagtgga
ggaaatagagggggtgggtttacagaggatgggcgtggtaggggtggctactga
DBGET
integrated database retrieval system
