Varanus komodoensis (Komodo dragon): 123029550
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Entry
123029550 CDS
T07701
Symbol
TIAM1
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04530
Tight junction
vko04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123029550 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
123029550 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vko04990
]
123029550 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
vko04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
123029550 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_2
PDZ_6
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
123029550
NCBI-ProteinID:
XP_044298631
Ensembl:
ENSVKKG00000008599
UniProt:
A0A8D2J9R1
LinkDB
All DBs
Position
Unknown
AA seq
1599 aa
AA seq
DB search
MGNAESQNVEHQFYGEKHASLSRKHTSRSLRLSNKAVRRTRHASSGKIIHRNSEVSTRSS
STPSIPQSLAENGLEPFTQEANLEDFGSPIWVDRMDVGLRPVSYHTDSSVTPSVDSSTVL
MAASVQSMPNSEGGRLYEDESTYLAEGGGRQHSYSTNGTTFLEPMSFKKKRSKSADIWRE
DSLEFSLSDLSQEHLTSNEEILGSAEEKDGEETRGREASNSRQPLVTCQRANSMSDLYSP
QISSTSINGGPRITSGYCRILVSRIPDIEDHKMSSTAMENVPSYSNYNTLPCRKSHCLSE
GITHPKMSHSNSMHGRRAKTTQDVNTGDGSEFADSGIEGATTDTDLLSRRSNATNSSYSP
TTSRAFAGSDSGSSSTGDGARQGVYENFRRELEMSSTNDNLDEAGSSLSDEQSSGTLSSP
GQSDILLTAGQGTVRKAGALAVKNFLVHKKNKKVELAARRKWKQYWVSLKGCTLFFYESD
GRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDYVFCLSNSLGDAFLFQTSSQTELENWIT
AVHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMHFLSLSSVRDSKKK
KTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKTLLAFASRPTKDAMGRLGIF
SVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFG
EGTDSVKKSLEGIFDDNMQEGKREKEAALTAVHPHNPDSDIWVHEYFTPSWYCLPNNQSA
LTVVHPGDTTRDVLEMICKAHQLDYSAHYLRLKFLTGNQMQSYIPKLEEDIYELLYKEIE
ICEKITQQIRIEKSDMLSDSYGFSLSSVEEEGIRRLHVNSVKETGLAFKKGLKAGDEIVE
INNKAAEDLNSSMLRDVLVQPSLCLIVRTYPEKEAGQKLIQLPPRRTDGSFDVNDSPVRT
VCSNQGPLPCSDQDSCTESTPEETEVHILESSDDSDKTSKSTEQVAAFCRSLHEMNPLDS
TVSPQEFIGPQQGTTRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLT
QEELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYAD
RFKLYSAFCASHTKVPKVLVKAKTDTVFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYP
LLLKELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGDKK
EVADLSMGDLLLHTTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGS
HRASIYEDSDPFRFRHMIPLEALQVRAPASADAETNTVCEIVHVKSESEGRPERSFHLCC
SSPEHRKDFLKSVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLSALKGARPAMNRAVS
APSKSLGRRRRRLARNRFTIDSDAVFASSPEKESQQASSSKDTDRWVEEQFDLGQYEEQE
DVKETDILSDDDEYCEPLRNTIVDKELQEQLQATSITSDQTYRGDKVRYAGGTHASRMTQ
LKKQAALSGINGGLEDNSEEVIWVRREDFVPPRKLNTEL
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcagagagccaaaatgtagaacatcagttttatggagaaaaacatgccagc
ttgagtcgaaaacatacatcacgctctcttcgcctttcaaacaaagcagttcgccgaacc
agacatgcttcctcaggaaaaattatccacaggaactcagaagtaagcacacgatctagc
agcactcccagcattcctcagtcattggcagagaatggtctggagccttttacccaagaa
gccaatttggaggattttggaagtccaatctgggttgacaggatggatgtgggcttaagg
ccagtttcctaccacaccgattcttctgtcactcccagtgtggatagcagcacagtcctc
atggcagcctctgtacagagtatgccaaattcagaaggcggcagactttatgaagatgag
tcaacttacctggctgaagggggtggtaggcaacattcatactcaacgaatgggaccact
ttcttggagcctatgagtttcaagaaaaaacgttcaaaatctgcagatatttggcgggag
gatagcttggaattttcactctctgatctcagtcaagagcatttgacaagcaatgaagag
atcctaggctcggctgaggaaaaggatggtgaggagactcgaggaagagaggcgagcaac
agccgccagccattggtcacctgccagcgtgccaattccatgagtgacttgtattctccc
cagatatcaagcacttcaatcaatggtggcccacgcatcacctcagggtactgtcgaatt
ttagtgtctcggatcccagatattgaagaccacaaaatgtcatcaaccgcaatggagaac
gttccttcttatagtaattacaacacactcccctgccgaaaatctcactgcctctctgaa
ggaatcacacatcccaaaatgagccatagcaacagtatgcatggcagacgagcaaaaacg
actcaggatgttaatacaggtgacgggagtgaatttgccgacagtgggattgaaggtgca
acaactgacacagacctcctttctagacggtcaaatgccaccaactccagctactctcca
accaccagccgggcctttgcaggcagtgacagcggaagttcttctactggagatggtgcc
cgccagggagtatatgagaactttcggagggagttggagatgagcagcaccaatgataat
ttggatgaagctggctcttcgctgagtgatgaacagagcagtgggactctgagttcccca
ggacaatctgatatccttctgacagcaggacaggggactgtacggaaagctggagctctt
gcagtgaaaaattttcttgtccacaaaaagaacaaaaaggtggagctagctgcacggagg
aagtggaagcaatactgggtttcattaaaaggatgtaccttattcttctatgaaagtgat
ggcagatctggaattgaccacaacagcatcccaaagcatgcagtctgggtggaaaacagc
atagtgcaagcggtgcccgagcacccaaagaaagactatgtattttgcctcagcaattcc
cttggtgacgcatttctgtttcagacttctagccaaacagagttggagaattggattaca
gcagttcattctgcttgtgcaacagcagtagcacgacagcaccacaaagaagacactgtc
aagttgttgaaaacagagattaaaaagttggagcagaagattgatatggatgagaagatg
aagaaaatgggggaaatgcatttcctcagtttgtcttctgtcagagactccaagaaaaag
aagaccattcttgaccagatctttgtttgggaacaaaacctggagcagtttcaaatggac
ctcttccgatatcgttgctatttagctagccttcaaggaggggagctaccaaatccaaaa
acattgcttgcatttgcaagtcgtccaactaaagatgcaatgggtcgtcttggaatcttt
tcagtgtcttcttttcatgcactggtggccgctcgtacaggtgaatctggtgtcaggaga
agaacacaggctatgtcaagatcagcaagtaagcgaagaagccggttttcttccctttgg
ggcttggacactacttcaaagaaaaaacaagggagaccaagcattaatcaggtgttcggt
gaaggaacggattctgtaaagaaatctctggaaggaatctttgatgacaatatgcaagaa
ggcaagagagaaaaagaagcggcgctaactgctgttcacccacataaccctgactctgac
atctgggttcatgagtatttcacaccttcgtggtactgccttccaaataaccagtctgct
ttgactgtagtccacccaggcgacaccaccagggatgtcctggagatgatttgtaaggca
catcagctggattactctgctcactatctacgtcttaagttcctaactggaaaccaaatg
caatcctacataccaaagctagaagaagatatttatgaactgttgtataaagaaattgaa
atctgtgagaaaattacgcaacaaattcggattgaaaaatctgacatgttatctgatagc
tatggattttctttatcctctgtggaagaagaggggattcgtcggctccatgtgaacagt
gtcaaagagacaggcctggctttcaaaaaaggactgaaagctggtgatgaaattgttgaa
attaataataaggctgctgaagacttgaattcatccatgctaagagatgttcttgttcag
ccttctctgtgccttatagtacggacttaccctgagaaggaggcagggcagaaactaata
cagctcccaccacgtcgcacagatggttcctttgatgtgaatgacagtccagttcgaact
gtatgcagcaaccaaggacccttgccctgcagtgatcaagacagttgtactgagtcaact
ccagaagagacggaagtgcacatcttggagtcctctgacgacagtgataaaacaagcaag
agtacagaacaggttgctgctttttgtcgcagtcttcatgagatgaatccacttgactct
actgtgagtcctcaagaatttattgggcctcagcaaggcactacaagacagctaactgat
gctgataaactacgcaaggttatttgtgaactccttgaaacagaacgcacatatgttaag
gacttaaattgtctaatggaaagatacctgaaacctctacagaaggaaacttttctcact
caggaagagcttgatgttctttttggaaatttgactgaaatggtggcatttcaagtagaa
ttcctgaaaacccttgaagatggggtgagattggttccagatctggaaaagcttgaaaaa
gttgaccagtttaaaaaagtgctgttttccttgggtggatccttcttgtattatgctgat
cgtttcaagctatacagtgccttctgtgccagccacacaaaggttccaaaagtacttgtg
aaagctaaaacagacacagtatttaaggcctttttggatgctcagaatcctagacgacaa
cactcatcgacattagagtcgtatctcattaagcctatccagaggatattgaagtatcct
cttctactgaaagaactctttgccctcactgatgcagaaagtgaagaacattatcacctt
gatgtggccataaaaacaatgaacaaagttgcgagccatattaatgaaatgcagaaaatc
catgaagaatatggtgctgtatttgaccagctcattgcagaacaaacaggagacaaaaaa
gaggttgcagatctttctatgggagacttgctattgcataccacagtcatctggctcaac
cctcctgcatcacttgggaaatggaagaaggaacctgaattggcagcgtttgtattcaaa
actgctgtggttcttgtatataaagatggttccaaacagaagaaaaagttgggtggatca
catagggcttcaatttatgaggactcagatccattccgttttcgacacatgatccctcta
gaagctctgcaagttcgagcaccagcaagtgcagatgcagagaccaatactgtctgtgag
atagttcatgtgaaatctgagtctgaaggccggccagagaggtccttccacctttgttgt
agttctccagaacacaggaaggattttctgaagtctgtgcattcaatattacgtgacaaa
caccgaaggcaacttcttaaaacggaaagtttgccttcatctcagcaatatgttcctttt
ggaggaaaaagactgagtgctttaaaaggtgcacggccagctatgaacagggcagtgtct
gccccaagcaagtcccttgggagaaggcggcggagattggctcgaaataggtttaccatt
gactcagatgctgtcttcgctagtagtcctgagaaagagtcgcaacaggcatctagcagc
aaggacactgaccgctgggtagaagagcagtttgaccttggtcagtatgaagaacaagag
gacgtaaaagaaacagacattctcagcgatgatgacgagtattgtgagcctctgaggaat
acaattgttgacaaagaacttcaggagcagttgcaggcaacttccattacaagcgaccag
acataccgaggagacaaggtacggtacgcagggggcacacacgcttccagaatgactcag
ttaaagaaacaggctgctctgtctggaattaatggtggcctggaagacaacagtgaggag
gtcatctgggttcgccgtgaagatttcgttccgccgaggaaactgaacactgagctttag
DBGET
integrated database retrieval system
