Varanus komodoensis (Komodo dragon): 123029666
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Entry
123029666 CDS
T07701
Name
(RefSeq) protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
vko
Varanus komodoensis (Komodo dragon)
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vko04515
]
123029666
Cell adhesion molecules [BR:
vko04515
]
Cadherins
Protocadherins
123029666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
123029666
NCBI-ProteinID:
XP_044298781
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MDRREGEDGQALAGQVRLLLLLLPLFSCWAASEQVRYSIPEEMEKGSVVGSLAKDLGLNA
RELPKRNLHAIPQARMQFFSINAERGDLYVSERIDREELCEALPLCTVNVEVVIENPLNV
FHVRVAVQDINDNAPQFVNGNINLEIIESTSPGTRFLLGEAEDPDIGANSLQDYQLSSNQ
YFTLEVRERKDGSKYAELVLQKPLDRESEQTLHLILTALDGGEPRKTGTAQIRINITDAN
DNPPVFSQDVYRVSLKENAPVGSQVLEVVASDKDAGTNAQIRYEFSNIPEKSQRKFSLDA
VSGIVTLIGLLDFEETKEYTMTVDAKDGGGLKAHCNIEVTAIDENDNAPAVTLASVFSPV
PEDSPSGTLIALISVSDKDSGDNGKVICHLQDDLPFKLLPFSSNYYKLLSDGPLDRERTP
EYNITVTALDAGTPPLSTHKSISLQVSDVNDNAPAFERPLYSIYVPENNPSGTSIRAAAG
SRRPGLVLALCLCLCLWPGPGGSAAAAASVRYAMPEERPVGAAVGNVALDLGLPLRQLQA
RNLRVVSGGGRKFFEADLGTGELRVAERIDREELCGALAPCVLSLQVVAESPLELFGVAV
EILDVNDHDPAFPSRQMRLEVSESVAPGARFPLESAQDPDAGAHALQTYQLSANAHFALD
VQARGDGTKYAELVLQKALDRERQRELRLALTALDGGSPPRSATLQVLVDVLDANDNSPV
FNQSVYRARVREDVPPRTPLARPSASDLDEGANGEVEYAFSSHTPAQLRQLFALDPATGE
LSLQGALDFEEARFYEVYIQAKDKGSNPAVAHCKVLLEVVDVNDNRPEISVTSVYSPVPE
DAAPGTVVALLSVTDRDSADNGLVSCSIPADLPFALSSSLQNYYTVQTKEALDRERASEY
NITVTARDAGSPSLGAEKRILVKVSDVNDNPPKYPQPSYDVYMEENNLPGTLIFNISASD
ADLDQNSHLSYSILENPGPLGDLAGRYFSINRENGSIYVLVPLDHEDAMEFQLVVQVRDG
GVPPLATNTTIHVFVTDQNDNPPRVLHPSPNGSALLLEAISPAVSPGYMVTKVVAWDADA
GYNAWLSYTLLQATDPGLFALGLHSGEISTARALREEDSRRQTLVILVKDSGDPALSSTV
TLTVTVAETSREALADLTAVSSVPQTKKHLTFYLILAVILISVAFFVTVVGVGVYKFCKW
RQSRDIFKASRSSLYRTPGPFNHIDTVRSGFAPPSFYQQVLTTDSRQSDLLYKMPFAPSP
VGSRQSTIPRRDAALYNQIIGTNSRLPAPSEQAQPNTDWRFSQAQRPGTSGSQNGDENGT
WPNNQFDTEMLQAMILASANEAAAAAAANPDGGSTLGGGAAAGTMGLSARYGPQFTLQHV
PDYRQNVYIPGGTSTLSTSAGKRDGKPAASGGGNKKKSGKKEKK
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggacagacgggaaggagaggatgggcaggcgctggccgggcaggtacggctgctgctg
ctgctgctgccgctgttctcctgctgggctgcctcggagcaggtccgctattccatcccg
gaggaaatggagaagggctccgtggtgggcagcctggccaaggacctggggctgaatgcc
agggagctgccaaagcgcaacctgcatgccatcccccaagctagaatgcagtttttcagc
atcaatgcagagcgtggagacctgtatgtgagtgaaaggatagacagggaggaactgtgt
gaggcgcttcccctttgcactgttaatgttgaggtggtcattgaaaaccctctgaatgtt
ttccatgtcagagtggcagtccaggacatcaatgataatgcgccccaatttgtcaatggc
aacatcaacttggagatcattgaatccacttcaccaggcacccgatttctccttggggag
gctgaagatccagatattggggcaaattctctccaggactaccagctgagctccaatcag
tacttcaccctagaagtgcgagagagaaaagatggcagcaaatatgcagaactggtgctg
cagaaaccgctcgatcgagaaagtgaacaaactctgcacttgatcctcactgccctcgat
gggggtgagccgaggaaaaccgggactgcccaaatccgtatcaacatcaccgatgccaac
gacaacccacccgtcttcagccaggacgtctacagggtcagtctgaaggaaaatgctcct
gtcgggtcccaggtgctcgaggttgtggcctctgataaagatgctggtacaaatgcccag
atccggtatgaattcagcaacataccagagaaaagtcaaaggaaattcagtctggacgca
gttagtggaatagttactcttattggactgctggactttgaggaaacaaaagagtatacc
atgacagtagatgcaaaggatggaggaggactgaaggcccactgcaacattgaagtgact
gctattgatgagaatgacaatgccccagcagtcacgttagcttctgttttcagcccggtc
ccagaagattctccttctggaaccctgattgctctcattagtgtgagtgacaaggattct
ggtgacaatggaaaggttatttgtcatttacaagacgatctaccctttaagcttcttccc
ttttctagtaattactacaagctgctgtcagacggtcccctggacagagaacggactcct
gagtacaacattacagtcacagccttggatgcagggaccccccctctctccacacacaag
agcatctcactacaggtgtccgatgtcaacgacaatgccccggcctttgagagacctttg
tacagcatctacgtgccggagaacaacccttcgggcacctccatccgggccgcggcgggg
agccggcggccggggctcgtgctcgcgctgtgcctgtgcctgtgcctgtggccgggcccc
ggcggctctgccgcggccgccgcctccgtgcgctacgcgatgcccgaggagcggcccgtc
ggcgcggccgtggggaacgtggcgctcgacttgggcctgccgctccggcagctgcaggcg
cgcaacctgcgcgtggtgtcggggggcggccgcaagttcttcgaggccgacctgggcacc
ggcgagctgcgcgtggccgagcgcatcgaccgcgaggagctgtgcggcgcgctggcgccc
tgcgtgctgagcctgcaggtcgtggccgagagcccgctggagctgttcggcgtcgcggtg
gagatcctggacgtgaacgaccacgaccccgcgttccccagcaggcagatgcgcctggag
gtcagcgagtccgtggcgcccggcgcgcgcttcccgctggagagcgcgcaggaccccgac
gcgggcgcccacgccctgcagacgtaccagctcagcgccaacgcgcacttcgcgctggac
gtgcaggcgcgcggcgacggcaccaagtacgccgagctggtgctgcagaaggcgctggac
cgcgagcggcagcgggagctccgcctggcgctcaccgcgctggacggcggcagcccgccg
cgctcggccacgctgcaggtcctggtggacgtcctggacgccaacgacaacagccccgtc
ttcaaccagtccgtctaccgcgcccgcgtgcgggaggacgtgcccccgcgcacgccgctc
gcgcgccccagcgcctccgacctggacgagggcgccaacggggaggtcgagtacgccttc
agcagccacacgcccgcgcagctgcggcagctcttcgccctggaccctgccacgggcgag
ctgagcctccagggagcgctggacttcgaggaggcccggttctacgaggtctacatccag
gccaaggacaagggctccaacccggccgtggcccactgcaaggtgctgctggaggtcgtc
gacgtgaacgacaaccgcccggaaatatccgtgacctcggtgtacagcccggtgcccgag
gacgccgcgccagggaccgtggtcgccctgctgagcgtcacggatcgcgactccgcggac
aacggcctggtcagctgctccatccctgcggacctcccttttgccctcagctcctccctg
cagaactactacacggtgcagacgaaggaagcgctggaccgggagcgcgcctccgagtac
aacatcaccgtcaccgcgcgagacgccggctcgccctctctcggggcggaaaagcgcatt
ctcgtgaaggtgtccgacgtaaacgacaacccgcctaaatacccacagccctcttatgac
gtgtacatggaagaaaacaaccttccggggaccctgatttttaacatcagtgcctctgat
gcggatctggaccagaattcgcacctttcctactccatcctcgagaaccccggccctttg
ggagatttggcgggcaggtacttttccattaaccgggagaacggctccatttatgtcctg
gtgcccttggaccatgaggacgcaatggagttccagctggtggtgcaggtccgggacgga
ggcgtgccccccctggccaccaacaccaccatccatgttttcgtcacagaccagaatgac
aatcccccccgagtgctgcaccccagcccgaacggcagcgccttgctcttggaggcgatc
tcgcccgcagtcagccccgggtacatggtcaccaaggtcgtggcctgggatgcggacgca
ggatacaacgcctggctctcctacacgctcctgcaggccactgaccccggactcttcgcc
ctgggcctgcattccggggagatcagcacagcccgggctctgcgggaggaagactcccgc
aggcagactttggtcatcctcgtgaaggacagcggggaccctgctttgtcctccaccgtg
accctcacggtcacggtggcagagacatccagggaggcactggcggacctgacagccgtg
tcctccgtcccccagaccaagaagcacttgactttctatttaatcctcgcggtcatcttg
atctccgtggccttctttgtcacagtggttggggtcggggtctataaattctgcaagtgg
aggcaatccagggatattttcaaggcctcccggagctccctctatagaacccccgggcct
ttcaaccacatagacactgtgcgcagtggatttgcccctcccagcttctaccagcaagtc
ctcaccactgactctcgccagagcgaccttctgtacaaaatgcccttcgctcccagtcct
gtgggcagccgccaaagcaccatcccaaggcgcgatgctgccctctataaccagatcata
ggcaccaatagcaggctcccagcgccctccgagcaagcacaacccaacacggactggcgt
ttctctcaggcgcagagaccaggaaccagcgggtcacagaatggagatgaaaatgggaca
tggccgaacaaccagtttgataccgaaatgctccaggccatgatcctggcttcagcaaac
gaagccgccgccgccgccgcggccaacccagacgggggctcgacgctgggaggaggcgcg
gccgcaggcaccatgggcctcagcgccaggtacggcccccagttcacactgcagcacgtc
ccggactaccggcagaacgtgtacatcccgggaggcacgtccaccctctccacctccgcg
ggcaagcgtgacgggaagcccgcggcctccggagggggcaacaagaagaagtcggggaag
aaggagaagaagtag
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