KEGG   Varanus komodoensis (Komodo dragon): 123035998
Entry
123035998         CDS       T07701                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
vko  Varanus komodoensis (Komodo dragon)
Pathway
vko04115  p53 signaling pathway
vko04210  Apoptosis
vko05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:vko00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    123035998 (APAF1)
   04115 p53 signaling pathway
    123035998 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    123035998 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz NB-ARC APAF1_C Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd APAF-1-like_WHD Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st CARD Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_SCAP WD40_like Beta-prop_NWD2_C WD40_RFWD3 PEP5_VPS11_N CARD_2 AAA_16 Ge1_WD40 B-prop_COPA_B_2nd Beta-prop_SPT8 AAA_22 Beta-prop_Nup120_160 NPHP3_N AAA_18 NACHT nSTAND1 ATPase_2
Other DBs
NCBI-GeneID: 123035998
NCBI-ProteinID: XP_044310688
Ensembl: ENSVKKG00000013457
UniProt: A0A8D2LCG2
LinkDB
Position
Unknown
AA seq 1250 aa
MDVKARNHLLWNCEALERDIKTSYIMDHMVGDEALTLSEEEQVRAQTTQRERAAMLIKII
LAKDNHAYISFYNALLHEGYKDLAALLQDGIPITSPYNGKRSVEGINSYVKTVLCEGGVP
QRPVVFVTREELTKRIQQKLYKLQSDPGWVIVYGMAGCGKSVLAAEALRDNNLLKDCFPG
GVHWVSVGKQDKAGLLMKLQNLCLRLDQDLQRPPLNIEEAKDRLRLLLLRKYSRSLLVLD
DIWDSWLLKAFDSNFQVLITSRDRSVTDSVTGNKYEVPVESGLTHEKALEILALFVNMEI
VELPEKAHSIVRECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQFKRIKKSSSYDYDA
LDEAMSISVEMLPEDFKDYYTDLSVLQKDVKVPSKVFCILWDMETEVAEDILQEFVNKSL
LFCDRNGKSFLYYLHDLQLDFLTEKNRCQLQALHKKVVHQYKQYYKQNIPSPSEEDCMYW
CNFLAYHMASASMQNELCALMFSLDWIKTKTELVGPAHLIHEYVEYSEILDQKGSTTREN
FQEFLSLNGHLLGRQPFLDIVQLGLCQPESSEVYRQAKLQAQRELNKGSFYVEWMNKTSI
KNMYRLVVSPHTDAVYHACFSQDRQRIASCGADKTLQVFKAESGEKLMEVKAHDDEVLCC
AFSADDKFVATCSVDKKVKVWNSRTGQLVYLFEEHAEQVNCCQFNNINHNQFLLATCSND
TFIKLWDLNKNYCRNTLFGHRSSVTHCRFSPDDKYVASCSADGTVKLWSAHSANEMKTID
IGRLFRNVDEYQDDVEVLVKCCSWSSNGSTLMVAAKNKLFLFDIKTGHLLTEVLISHHSN
IQYCDFCPNSQMVAVALSHYSVEIWNIESLSKIADCRGHMSWVHSVTFSLDGFLFLTSSD
DLTIRIWETSKVCKSSAVVLKRDIDVLFPGNEVIILAIDNLKHLQLINGYTGHTVYQTEE
QEHFIACCCLSEDLQTVAFGEENGTVKVLNLSSRKVLKSRSGHRKSVQRCQFTSAGKILI
SSSDDSTIQVWNWQSDECIVLKGHKEAVKNFYLLKSSRLLSWSFDGTVKFWNIVTGELER
DLSCHEDAILSCAVSPDTTMFATTSADKTAKIWSFETSSVLHKLNGHKGCVRCCAFSFNN
ELLTTGDDNGDIRVWDISKGELLHLYSRYSVDEGESAHGGWVTDLRFSPDNKILVSSGGY
IKWWNVDTGQPLQTFYTNGTNLKSLHVSPDFKVCVTVDNLGILYVLQIMK
NT seq 3753 nt   +upstreamnt  +downstreamnt
atggatgtgaaggctcgaaatcacttgctttggaattgcgaagctttggaaagagatata
aagacttcttatataatggatcatatggttggagatgaagcattaacattatcggaagag
gagcaagtaagggcccagactacacaaagagaacgagcagcaatgctaataaaaataatt
cttgccaaagataatcatgcgtatatatccttttataatgcattgcttcatgaggggtac
aaagatcttgctgcacttcttcaggatggtattcccattacttccccttacaatggaaaa
agatctgtggagggaataaactcatatgttaagactgtcctttgtgaaggtggagtccca
caacgacctgtagtgtttgtcactcgcgaagaactaacaaaaagaatacaacagaaacta
tacaagttacaaagtgatccaggatgggttattgtttatgggatggcaggctgtggaaag
tctgttttggcagcagaagcactgcgtgataacaatcttttgaaagattgcttcccagga
ggagtacattgggtttctgttggtaaacaagacaaggcaggactgctaatgaaactccaa
aatctctgtctgagattagatcaggacttacagaggccaccacttaatattgaggaagct
aaagatcgtcttcggttactgttgttgcgcaaatactcaaggtctctcttggtgcttgat
gacatttgggattcctggctgttaaaagcctttgacagtaattttcaagttcttatcacc
agtagggacaggagcgtaacagactctgtaactggtaataaatatgaagttcctgtggaa
agtggactaacacatgaaaaagcacttgaaatattagccctgtttgttaatatggaaata
gtggagctgccagaaaaagctcatagtattgtgagagaatgcaaaggttctcctcttgta
gtatccttgataggagcattattacgagactttcccaatcgctgggaatactaccttaag
caacttcagaataaacagtttaaaaggataaagaaatcatcttcttatgattatgatgct
cttgatgaagcaatgtctataagtgttgaaatgttgccagaagattttaaagattattac
acagatctttctgtccttcagaaggatgttaaagtgccttcaaaggtattctgtattcta
tgggatatggagactgaggtagctgaagacatactacaggaatttgttaacaaatctctt
ttgttttgtgatcggaatgggaaatcattcctttattatttgcatgatcttcagcttgat
tttcttactgagaagaatcgctgtcagctccaagcgctgcataaaaaagtagttcatcag
tataagcagtattataagcagaatataccttctccatcagaagaggactgcatgtactgg
tgtaattttctggcttaccatatggcaagtgccagtatgcaaaatgaactctgtgctctt
atgttttcactagactggattaaaaccaaaacagaattggtagggcctgctcatttgatt
catgaatatgttgaatacagtgaaatattagatcaaaagggttccactacacgtgaaaac
ttccaggaatttctgtctttaaatggacatctacttgggcggcaaccctttctagatatt
gtacagctgggactttgtcagccagaaagctctgaggtatatcgacaagcaaaactacaa
gctcagcgagaacttaataaaggatctttctatgtggaatggatgaataaaacctccata
aagaatatgtaccgtttggttgtgagtccacacacagatgcagtttaccatgcttgcttt
tcccaggatagacaaagaatagcttcatgtggagctgataaaacattacaggtatttaaa
gctgaaagtggagaaaagcttatggaagtgaaagcacatgatgatgaagttctgtgttgt
gctttttcagcagatgacaaatttgttgccacttgttctgtggataaaaaagtaaaggtc
tggaattcaagaacaggccagcttgtgtatttatttgaagaacatgcagagcaggtcaac
tgctgccagtttaataatataaatcataaccaattcctactagctacatgttcaaatgac
acttttatcaaactctgggatttgaacaaaaactactgtcgcaatacattgtttggccac
agaagttctgttacccactgcagattttcaccggatgacaagtatgtggctagttgctca
gcagatggaacagtgaagctttggtctgcccattcagcaaatgaaatgaaaactattgac
ataggaaggctcttcagaaatgtagatgaataccaggatgatgtggaggtattggtgaag
tgttgctcctggtcatctaatggaagtacattaatggtggcagccaaaaataagcttttt
ctttttgacattaagaccggccatttgttgacagaggttcttataagccatcacagcaat
attcaatattgtgacttttgtcccaacagtcagatggtagcagttgcgttatcacattat
tctgttgagatatggaatattgaatcactttccaaaatagctgactgccgaggccatatg
agctgggtgcattctgtgacattttcacttgatgggtttttatttctcacttcttctgat
gacctcacaataagaatttgggagacaagtaaggtgtgcaaatcctctgctgttgtgctg
aaacgtgacatagatgttttgtttccaggcaatgaagtgatcattttggctattgacaat
ttgaagcatctgcagttaataaatggatacacagggcatactgtttatcagactgaagaa
caggagcatttcattgcctgttgttgcctaagtgaagacctgcagactgttgcctttgga
gaggagaatggaacagtaaaggtgttaaacctctcaagtagaaaagttttaaaatccaga
agtgggcacaggaaatctgtgcagcgttgccagtttacatctgctggaaaaatacttata
tcaagctctgatgactcaactatacaggtatggaattggcagtcagatgaatgcattgtt
ctgaaaggtcacaaggaagctgtcaagaatttttaccttcttaaaagttcaaggcttctt
tcatggtcatttgatgggacagttaagttctggaacatagttactggagaactagaaaga
gatcttagttgccatgaagatgctattctttcttgtgctgtttcacctgataccactatg
tttgccactacctctgctgacaagactgccaagatttggagttttgaaacttcatcggtt
cttcataagctgaatggtcataaaggttgtgtgagatgctgtgctttctcctttaataat
gagttgttgaccacaggagatgacaatggagacatacgggtttgggatatctcaaaaggt
gagctgcttcacttatattcccgttattcagtagatgaaggtgaatctgcacatggaggt
tgggtcacagaccttcgcttttcccctgataataagatacttgtttcttctgggggatac
attaagtggtggaatgtggatactggccaacccctacaaacattctatacaaatggaaca
aatcttaaatcattgcacgtgtccccagatttcaaagtatgtgtgactgttgataacctt
ggcattctttatgtgctacagattatgaaataa

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