Candidatus Vallotia laricis: GKR41_00273
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Entry
GKR41_00273 CDS
T07905
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vla
Candidatus Vallotia laricis
Pathway
vla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKR41_00273 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_00273 (nth)
Enzymes [BR:
vla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GKR41_00273 (nth)
DNA repair and recombination proteins [BR:
vla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GKR41_00273 (nth)
Prokaryotic type
GKR41_00273 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UDG82914
LinkDB
All DBs
Position
complement(356935..357579)
Genome browser
AA seq
214 aa
AA seq
DB search
MNANKRRALYETFQKLNPQPTTELKYTTSFELLIAVILSAQATDVSVNKAMSQMFQIANT
PKDILALGEEGIEKHIKGIGLYRVKSKHIISTCRILLDKCHGKVPDNREELEALPGVGRK
TANVILNTIFGHSVIAVDTHIFRVANRTRLAPGKDVRAVEIALEKFTPAEFRHDAHHWLL
LHGRYVCRSRMPKCRNCVIETLCEFESKARIFTQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaataagcgccgcgcactctacgaaacttttcaaaaactgaaccctcagccg
accacagaactgaagtatacaacatctttcgaactcctcattgcagtgatactttcggct
caggcgactgatgtttccgttaataaagcaatgtctcaaatgttccaaatcgctaataca
ccaaaagatattctagcgctcggcgaagagggcatagagaaacatattaaggggattgga
ctgtatcgggttaaatctaagcatataatctcgacctgcagaattttgttggacaaatgc
cacggaaaagtgccagataatcgcgaagaactcgaagcccttcccggggtaggccgaaaa
acagcgaacgttatattaaatactatatttgggcattcagtcattgcggtcgatacacat
atcttccgtgttgcgaaccgcactaggttagcacccggtaaggacgttcgggcagtagaa
atagcgttagaaaaattcacgccagccgaattccggcatgatgcacatcactggctactt
ttgcatggccgatatgtatgccgctcgcggatgcctaaatgccggaattgtgtgattgag
acactctgcgaatttgaaagtaaagcgcgcattttcactcaatag
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