Vulpes lagopus (Arctic fox): 121471306 Help Entry 121471306         CDS       T07435                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism vlg  Vulpes lagopus (Arctic fox) Pathway vlg04010   MAPK signaling pathway vlg04064   NF-kappa B signaling pathway vlg04120   Ubiquitin mediated proteolysis vlg04140   Autophagy - animal vlg04144   Endocytosis vlg04380   Osteoclast differentiation vlg04620   Toll-like receptor signaling pathway vlg04621   NOD-like receptor signaling pathway vlg04622   RIG-I-like receptor signaling pathway vlg04657   IL-17 signaling pathway vlg04722   Neurotrophin signaling pathway vlg04936   Alcoholic liver disease vlg05132   Salmonella infection vlg05133   Pertussis vlg05135   Yersinia infection vlg05140   Leishmaniasis vlg05142   Chagas disease vlg05145   Toxoplasmosis vlg05152   Tuberculosis vlg05160   Hepatitis C vlg05161   Hepatitis B vlg05162   Measles vlg05168   Herpes simplex virus 1 infection vlg05169   Epstein-Barr virus infection vlg05170   Human immunodeficiency virus 1 infection vlg05171   Coronavirus disease - COVID-19 vlg05200   Pathways in cancer vlg05222   Small cell lung cancer vlg05235   PD-L1 expression and PD-1 checkpoint pathway in cancer vlg05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:vlg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     121471306 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     121471306 (TRAF6)    04064 NF-kappa B signaling pathway     121471306 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     121471306 (TRAF6)    04140 Autophagy - animal     121471306 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     121471306 (TRAF6)    04621 NOD-like receptor signaling pathway     121471306 (TRAF6)    04622 RIG-I-like receptor signaling pathway     121471306 (TRAF6)    04657 IL-17 signaling pathway     121471306 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     121471306 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     121471306 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     121471306 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     121471306 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     121471306 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     121471306 (TRAF6)    05161 Hepatitis B     121471306 (TRAF6)    05160 Hepatitis C     121471306 (TRAF6)    05171 Coronavirus disease - COVID-19     121471306 (TRAF6)    05162 Measles     121471306 (TRAF6)    05168 Herpes simplex virus 1 infection     121471306 (TRAF6)    05169 Epstein-Barr virus infection     121471306 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     121471306 (TRAF6)    05135 Yersinia infection     121471306 (TRAF6)    05133 Pertussis     121471306 (TRAF6)    05152 Tuberculosis     121471306 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     121471306 (TRAF6)    05140 Leishmaniasis     121471306 (TRAF6)    05142 Chagas disease     121471306 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     121471306 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     121471306 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:vlg04131]     121471306 (TRAF6)    04121 Ubiquitin system [BR:vlg04121]     121471306 (TRAF6) Enzymes [BR:vlg01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      121471306 (TRAF6) Membrane trafficking [BR:vlg04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     121471306 (TRAF6) Ubiquitin system [BR:vlg04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     121471306 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX TRAF3_RING RING_XB3-XBAT31 PspA_IM30 U-box Spc29 zf-RING_11 DUF4455 ATG16 HAP1_N Med21 DUF16 AAA_13 DUF7310 Myosin_tail_1 UPF0242 Filament EzrA DUF3450 Laminin_II DUF7607 DUF948 CENP-F_leu_zip TMF_DNA_bd DUF1664 Motif Other DBs NCBI-GeneID:  121471306 NCBI-ProteinID:  XP_041577783 LinkDB All DBs Position 11:55835334..55856715 Genome browser AA seq 541 aa AA seqDB search MSLLNCENSCGSSQSESDCCPAMASSCSAAVKDDSVSGTTSTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNEGCLHKMELRHLEDHQLHCEFALMNCLQCQRTFQKCQLNIHILK ECPRRQVSCMNCAALMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLGQAVQSLSLALAPVPPRDVPPYDSSSV SRISSTCHPEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQSMHVSELKRNIRTLEDKV AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ RCANYISLFVHTMQGEYDSHLPWPFQGTIRLAILDQSEAPVRQNHEEIMDAKPELLAFQR PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSPRREGFQPRSTDSG I NT seq 1626 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaagcgactgctgt cctgccatggccagctcctgtagcgctgcagtgaaagatgacagtgtgagtggaaccacc agcacggggaacctctccagctcttttatggaagagatccaggggtatgatgtggagttt gacccacccctggaaagcaagtatgagtgccccatctgcttgatggcattacgggaagca gtgcaaacaccatgtggccataggttctgcaaagcttgcatcatcaaatcaataagggat gcaggtcacaaatgcccagttgacaatgaaatactcttggaaaatcaactgtttcctgac aattttgcaaaacgggagattctttctctgatggtgaagtgtccaaatgaaggttgtttg cataaaatggaacttaggcatcttgaggatcaccaattacactgtgagtttgctctcatg aattgtctccagtgccaacgtaccttccaaaaatgccaacttaatattcacattctcaag gagtgcccgaggagacaggtttcttgcatgaactgtgctgcattgatggcattcgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatacc atgctcatcagagaacagatgcctaatcattatgatctagactgtcctacagccccaatt ccatgcacattcagtacctttggttgccatgtaaagatgcagaggaatcacttggcacgc cacctacaggagaatacccagtcacacatgagaatgttggggcaggctgttcagagttta agccttgctttagctcctgtacctccgcgtgatgtgccgccgtatgattcttcctcggtg tcccggatttccagcacgtgtcacccagaggttcagaatttccaagaaaccattcagcag ttagagggtcgtcttgtaagacaagaccatcaaatccgagagctaactgctaaaatggaa actcagagcatgcatgtaagtgagctcaaaagaaatattcgaacccttgaggacaaagtt gctgaaatagaagcacagcagtgcaacgggatctacatctggaagatcggcaacttcggg atgcatctgaaatctcaggaagaggagaaacctgttgtcattcacagccctggattctac acagggaagcctgggtacaaactgtgcatgcgcctgcacctccagttaccaactgctcag cgctgtgctaattatatatccctctttgtccacacaatgcaaggagagtatgatagccac ctcccctggcccttccagggtacaatacgccttgcgattcttgatcaatctgaagcgccc gtcaggcaaaaccatgaagagataatggatgccaaaccagagctgcttgccttccagaga cccacgatcccacggaacccaaaaggttttggctacgtgacttttatgcatctggaagct ctaagacaaagaaccttcattaaggatgatactttattagtacgctgtgaggtctctacc cgctttgatatgggcagtccccggagggaaggttttcagccacgaagtactgattcaggg atatag

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