Vulpes lagopus (Arctic fox): 121472968
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Entry
121472968 CDS
T07435
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121472968 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121472968 (SMG6)
03032 DNA replication proteins [BR:
vlg03032
]
121472968 (SMG6)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121472968 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
121472968 (SMG6)
DNA replication proteins [BR:
vlg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
121472968 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
PIN_9
Motif
Other DBs
NCBI-GeneID:
121472968
NCBI-ProteinID:
XP_041580652
LinkDB
All DBs
Position
12:15027841..15272664
Genome browser
AA seq
691 aa
AA seq
DB search
MICQGDIARYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYY
YMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEELELSPDQWRKGKKSTFRHVGD
DTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAHGKLFTRIG
METFPAVAEKVLKEFQVLLQHSPPPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQ
EQATALGLAMFSLLVRRCTYLLKESAKAHLSSPEDEDDQDDIKVSSFVPDLKELLPSVKV
WSDWMLGYPDTWNPPPTSLDLPSQVAMDVWSMLADFCNILTAVNQSEVPLYKDPDDDLTL
LILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAF
KGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAK
KLALARKIAEQQRRQEKIQAVLEDQSQMRQMELEIRPLFLVPDTNGFIDHLASLARLLES
RKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFESRDTCLRAL
TSRGNELESIAFRSEDITGQLGNNDDLILSCCLHYCKDKAKDFMPTNKEEPIRLLREVVL
LTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgatttgccaaggagatatcgctaggtatcgggaacaagccaatgacacagcaaactac
gggaaagcacgcagttggtatctaaaggcacagcatattgctcccaagaatgggcgtccc
tataatcagttggctctgctggcagtgtacacgaggaggaagcttgatgctgtctattac
tatatgcgcagtttagctgccagcaaccctatcctgactgccaaggagagtctcatgagc
ttgtttgaggagaccaaacgaaaggcagaacagatggaaaaaaagcaacatgaggaattg
gaactgagccctgaccagtggcggaaaggaaagaagtctactttccggcatgttggagat
gacaccactcgcttagagatctggatccatccatcacatccccggtcctcccagggcact
gaatctgggaaggattctgagcaggagaatgggctgggcagcctgagcccaagtgatctg
aacaaaaggttcatcctcagttttctccatgcccatgggaagctgtttacccggattggg
atggagacattccctgcggtggctgagaaagtcctcaaggaattccaggtgctgctgcag
cacagcccacctcctattggaagtacccgcatgctgcagcttatgaccatcaacatgttt
gccgtacacaactctcagctgaaagactgcttctcggaggagtgtcgctctgtgatccag
gagcaagccacagcactgggcttggccatgttttctctcctggtgcggcgctgcacctac
ttacttaaggagtctgccaaagctcatctgtcctcccctgaggacgaggatgaccaagat
gacatcaaggtgtcttccttcgtcccggacctgaaggaactgctccccagtgtgaaagtc
tggtcagattggatgcttggctacccagacacctggaatcctccacccacatccctggac
ctgccctcacaggttgctatggacgtgtggtcgatgctggctgatttctgtaacatactg
actgcagtgaatcagtctgaggtgccactgtacaaggacccggacgatgacctcaccctt
cttatcctggaagaggatcggcttctctcgggttttgtccccttactggctgcccctcag
gacccctgctacgtggagaaaacctcggataaggttattgcagccgactgcaaaagggtc
acagtgctgaagtattttctggaagccctttgtggacaagaagagcctctcctggcattc
aagggtggaaaatatgtgtcagtggcacccgtcccagacaccatgggaaaggaaatggga
agccaagagggaaaacaactggaagatgaggaggaggacgtggtgattgaagactttgag
gaagattcagaggccgaaggcagcgggggtgaggatgacatcagggaacttcgggccaag
aagctggctctggcaaggaagatagctgagcaacagcgtcgccaagaaaagatccaggct
gtcctggaggaccagagtcagatgaggcagatggagctcgagatcagacccttgttcctt
gtaccagacaccaacggcttcattgaccacctggccagtctggcacggctgctggagagc
aggaagtacatcctggtggtgcccctcattgtgatcaatgagctggacggcctggccaag
gggcaggagacagaccaccgggctgggggctatgcccgtgtagtgcaggaaaaggcccgg
aagtccatcgaattcctcgagcggcgatttgagagtcgggacacttgtctacgggccctg
accagccgtggcaatgaacttgaatccatcgcctttcgcagtgaggacatcactgggcaa
ctgggtaacaacgatgacttgatactctcctgttgcctccactactgcaaagacaaggct
aaggacttcatgcccaccaacaaagaggagccaatccggctgctgcgggaggtggtgctg
ttgacagatgaccgcaacctgcgtgtgaaggcactgacgaggaatgtgcctgtgcgggac
atcccagccttcctcacgtgggcccaggtgggctga
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