Vulpes lagopus (Arctic fox): 121474506
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Entry
121474506 CDS
T07435
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03018
RNA degradation
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121474506
09123 Folding, sorting and degradation
03018 RNA degradation
121474506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121474506
03041 Spliceosome [BR:
vlg03041
]
121474506
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121474506
mRNA degradation factors
5'-3' decay
Lsm complex
121474506
Spliceosome [BR:
vlg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121474506
Complex C
U2 snRNP components
121474506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
DUF150_C
Motif
Other DBs
NCBI-GeneID:
121474506
NCBI-ProteinID:
XP_041583331
LinkDB
All DBs
Position
13:complement(39309435..39329798)
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AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDMEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaactaccaacaccgtagaagagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgaccgagagcttcga
ggcagattacatgcatatgatcagcatttaaatatgatattgggagatatggaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacgg
aatattccgatgctttttgtccggggagatggtgttgtactagttgctcctccattaagg
gtcggctga
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