Vulpes lagopus (Arctic fox): 121474694
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Entry
121474694 CDS
T07435
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121474694 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121474694 (IRF5)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121474694 (IRF5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
DUF2262
Motif
Other DBs
NCBI-GeneID:
121474694
NCBI-ProteinID:
XP_041583692
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All DBs
Position
13:3916343..3926297
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AA seq
605 aa
AA seq
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MFTVSQISELSGLATFISPGSGWSLVQKGELSHQSFEAWGLGWGVSYSSCRSPDLGTALK
RGLPDGDFLAAWRWRLTTTTQKDPLAMNQPAPRAPPPPRRVRLKPWLVAQVNSCQYPGLQ
WVNGERKFFCIPWRHATRHGPSQEGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCAL
NKSRDFRLIYDGPRDMPPQPYKIYEVCSNGSAPAESQPSEDYTFGAGEEEEEEEEDMSSG
PFLAASACTDVLQRMLPSLSITEAVQPGPPMAPYSLPKEDVKWPPTLQPPVVLGPPAPDP
SLLGPTPGNPAGFGELLPEVLPSLQPGPLAASLPPTGEQLLPDLLISPHMLPLTDLEIKF
QYRGRPPRALTISNPQGCRLFYSQLEPTQDQVELFGPVSLEQVRFPSPEDIPSDKQRFYT
NQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHGSHPNPIQREVKTKLFSLEH
FLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGEL
SWSADSIRLQISNPDLKDRMVEQFKELHHLWQSQQRLQPVAQAPAVAGLSAGQGAWPMHS
VGMQQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagtgagtcagatttccgagttgtctggtctggccactttcatttcccctggg
tctgggtggagtttggttcagaaaggggaactgagccaccagtcttttgaggcctgggga
ctgggctggggggtctcttactcttcctgtcgcagccctgatctgggcactgctctgaag
agaggcctgcccgatggagactttttagcagcgtggaggtggcgcttaacaactacaacc
caaaaagaccccttggccatgaaccagcctgcccccagggcaccccctccgccgcgccgc
gtgcgactgaagccctggctggtggcgcaggtgaacagctgccagtacccagggcttcag
tgggtcaatggggaaaggaaattcttctgcatcccctggcgccatgccacgcgacacggc
cccagccaggagggggataataccatcttcaaggcctgggccaaggagacaggaaagtac
accgagggggtggacgaggcggacccagccaagtggaaggccaacctgcgctgtgccctt
aacaagagccgtgacttccgcctcatctatgatggaccccgggacatgccgcctcagccc
tacaagatctacgaggtctgctctaatggctccgctcccgcagagtcccagcctagtgag
gattacacttttggtgcgggagaggaggaggaggaagaagaggaagacatgagctcgggg
ccattcctggcagcgtcggcctgcactgacgtgctccagaggatgttaccaagcctgagc
atcacagaagcagtgcaacctggcccccccatggcaccctattctttacccaaagaggat
gtcaagtggccgcccaccctccagccgcctgtggtgctgggccctcctgcaccagacccc
agcctgctgggccccacccctggcaaccctgctggctttggggagcttctccctgaagtc
ctgccgagcctgcagcctgggcccctggctgccagcctgccccccacaggcgaacaactc
ctgcccgacctgctaatcagcccccacatgctgcccctgacggacctggagatcaagttc
cagtaccgggggcggccaccccgtgccctcaccatcagcaacccccaggggtgccggctc
ttctacagtcagctggaacccacccaggaccaggtagagctcttcggccccgtgagcctg
gagcaagtgcgcttccccagccctgaggacatccccagcgacaagcagcgcttctacaca
aaccagctgctggatgtcctggaccgcggcctcatactccagctgcagggccaagatctg
tatgccatccgcctgtgccagtgcaaggtgttctggagcgggccctgtgcctcggcccac
ggctcacaccccaaccccatccagcgggaggtcaaaaccaagcttttcagcctggagcat
tttctcaatgagctcatcctgttccagaagggccagactaacaccccaccgccatttgag
atcttcttctgctttggggaggagtggcctgaccgcaaaccccgagagaagaagctcatc
actgtacaggtggtgcctgtagcagctaggctgttgctggagatgttctcaggggagctt
tcttggtcagctgatagtatccggctacagatctcaaacccagacctcaaagaccgcatg
gtagagcagttcaaggagctccatcacctctggcagtcccagcagcggttgcagcctgtg
gcccaggcccccgctgtggcaggcctcagtgctggccagggggcctggcccatgcactca
gttggcatgcaacaatga
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