Vulpes lagopus (Arctic fox): 121476563
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Entry
121476563 CDS
T07435
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03018
RNA degradation
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121476563
09123 Folding, sorting and degradation
03018 RNA degradation
121476563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121476563
03041 Spliceosome [BR:
vlg03041
]
121476563
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121476563
mRNA degradation factors
5'-3' decay
Lsm complex
121476563
Spliceosome [BR:
vlg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121476563
Complex C
U2 snRNP components
121476563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
vATP-synt_E
RimP_C
YfkB
Motif
Other DBs
NCBI-GeneID:
121476563
NCBI-ProteinID:
XP_041586592
LinkDB
All DBs
Position
15:complement(12287412..12287877)
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AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKQNILMLFIQGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatgtggaccagcaacaaactaccaacaccgtagaagagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgaccgagagcttcga
ggcagattacatgcatatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacag
aatattctgatgctttttatccagggagatggtgttgtactagttgctcctccattaaga
gttggctga
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