Vulpes lagopus (Arctic fox): 121483210
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Entry
121483210 CDS
T07435
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04360
Axon guidance
vlg04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
121483210 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
121483210 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vlg01009
]
121483210 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vlg04040
]
121483210 (TRPC5)
Protein phosphatases and associated proteins [BR:
vlg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121483210 (TRPC5)
Ion channels [BR:
vlg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121483210 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
121483210
NCBI-ProteinID:
XP_041597510
LinkDB
All DBs
Position
X:complement(84716543..84987517)
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHSRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTVPRASGTQGKSKSESSSKRSFVG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIAQQHYMWQDIRYSQMEKGKAGACSQSEM
NLSEVELGEARGAAPSSECPLSCSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactctactacaaaaaagtcaactactcaccatacagagatcgcatccccctg
caaattgtgagggctgagactgagctctctgcagaagagaaggctttcctcaatgcggtg
gagaagggggactatgctaccgtgaagcaggccctacaggaggctgaaatctactacaat
gtcaacatcaactgcatggatcctctgggccggagtgccctgctcattgccattgagaat
gagaacttggagatcatggagctactgctgaaccacagcgtgtatgtaggcgatgcattg
ctctacgccatccgcaaggaggtggtgggtgctgtggagcttctgctcagttacaggcgg
ccgagtggagagaagcaggtccccaccctgatgatggatacccagttctctgagttcaca
ccagacatcactcccatcatgctggctgcccacaccaacaattatgagatcatcaaattg
cttgtccaaaaacgagtcactattccacggccccaccagattcgctgcaactgcgtggag
tgtgtgtccagttcagaggtagacagcctgcgccattcccgctcccggctgaatatctat
aaggctctagcaagcccctcgctcatcgccttatcaagtgaggaccccatcctaactgcc
ttccgtctgggctgggagctcaaggagctcagcaaggtggagaatgagttcaaggctgag
tatgaggagctctcccagcagtgcaagctctttgccaaagacctgctggaccaagctcgg
agctcccgggaactggaaatcatcctcaaccatcgagatgaccacagtgaagagctggac
cctcagaagtaccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcctaattgccaacaattacttgccactctgtggtatgacggcttccct
ggatggcgacggaaacactgggtagtcaagcttctaacctgcatgaccattgggttcctg
tttcccatgctgtccatagcttatctgatctcacccaggagcaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacagcatcatatctgaccttcctcttcatg
cttctcctggcttctcaacacatcgtcaggacagaccttcatgtacaggggcctccccca
actgtggtggaatggatgatattgccttgggttctcggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatatatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccgactctgattgcagaagca
ctctttgcaatatccaacattttaagttcgttgcgcctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgctgctcgatatcctcaaattc
ctctttatctactgcctggtactgctagcttttgccaacggattgaaccagctatacttt
tattatgagaccagagcaatcgatgagccaaacaactgcaagggaatccgatgtgagaaa
cagaataatgccttctccacgctctttgaaaccctccagtcactcttctggtctgtattc
ggccttttaaatctctatgttaccaatgtgaaagccagacacgagttcacagagtttgtg
ggagctaccatgtttgggacatacaacgtcatctccctagtagtgctgctgaacatgctg
attgccatgatgaacaactcctaccagcttattgctgatcatgccgatattgagtggaag
tttgcaaggacgaagctctggatgagttactttgatgaaggcggcaccttgccacctcct
ttcaacatcatccccagtcccaagtcatttctataccttggtaactggttcaacaatacc
ttctgccccaaaagagatcctgatggtagacggagaaggcacaacttgagaagcttcaca
gaacgccacgctgacagcctgatacagaatcaacattatcaggaagttatcaggaattta
gtcaaaagatatgtggctgctatgataagaaattccaaaacaaatgagggactaacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatatgaagtacttgacctc
ttaggaaataggaaacactcaaggagaagcttttccacgagcagcaccgaactctctcag
agggacgataccaatgatggcagtggtggggcacgggccaaatccaagagtgtctctttc
aacttaggctgcaaaaaaaaggcctgccacgggccacctctcatcagaactgtgccaaga
gccagtggcacccaagggaagtcaaaatctgagtcatcgagcaaacgctccttcgtgggt
ccttctctcaagaaactcggtcttctgttttccaagttcaatggtcatatgtccgaacca
agttcagagccaatgtacaccatttcggatggcattgctcaacagcactacatgtggcaa
gacatcagatattctcagatggagaaagggaaagcaggggcctgttctcagagtgaaatg
aacctcagtgaggtagaattaggtgaagcccggggtgctgctccgagcagtgaatgccct
ctatcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattccaaactt
ttagactcctcagaggatgtgttcgaaacttggggagaggcctgcgacctgctcatgcac
aaatggggtgatggacaggaagaacaagtaacaactcgactctaa
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