KEGG   Vulpes lagopus (Arctic fox): 121486869
Entry
121486869         CDS       T07435                                 
Name
(RefSeq) LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP beta 1 chain
  KO
K06752  MHC class II antigen
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg04145  Phagosome
vlg04514  Cell adhesion molecules
vlg04612  Antigen processing and presentation
vlg04640  Hematopoietic cell lineage
vlg04658  Th1 and Th2 cell differentiation
vlg04659  Th17 cell differentiation
vlg04672  Intestinal immune network for IgA production
vlg04940  Type I diabetes mellitus
vlg05140  Leishmaniasis
vlg05145  Toxoplasmosis
vlg05150  Staphylococcus aureus infection
vlg05152  Tuberculosis
vlg05164  Influenza A
vlg05166  Human T-cell leukemia virus 1 infection
vlg05168  Herpes simplex virus 1 infection
vlg05169  Epstein-Barr virus infection
vlg05310  Asthma
vlg05320  Autoimmune thyroid disease
vlg05321  Inflammatory bowel disease
vlg05322  Systemic lupus erythematosus
vlg05323  Rheumatoid arthritis
vlg05330  Allograft rejection
vlg05332  Graft-versus-host disease
vlg05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121486869
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121486869
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    121486869
   04612 Antigen processing and presentation
    121486869
   04658 Th1 and Th2 cell differentiation
    121486869
   04659 Th17 cell differentiation
    121486869
   04672 Intestinal immune network for IgA production
    121486869
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    121486869
   05164 Influenza A
    121486869
   05168 Herpes simplex virus 1 infection
    121486869
   05169 Epstein-Barr virus infection
    121486869
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    121486869
   05152 Tuberculosis
    121486869
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    121486869
   05140 Leishmaniasis
    121486869
  09163 Immune disease
   05310 Asthma
    121486869
   05322 Systemic lupus erythematosus
    121486869
   05323 Rheumatoid arthritis
    121486869
   05320 Autoimmune thyroid disease
    121486869
   05321 Inflammatory bowel disease
    121486869
   05330 Allograft rejection
    121486869
   05332 Graft-versus-host disease
    121486869
  09166 Cardiovascular disease
   05416 Viral myocarditis
    121486869
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    121486869
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vlg04147]
    121486869
Exosome [BR:vlg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121486869
  Exosomal proteins of epithelial cells
   121486869
  Exosomal proteins of breast milk
   121486869
SSDB
Motif
Pfam: C1-set MHC_II_beta ig Ig_3 C2-set_2 Ig_2
Other DBs
NCBI-GeneID: 121486869
NCBI-ProteinID: XP_041604183
LinkDB
Position
1:complement(70573330..70613622)
AA seq 290 aa
MPPPEAFPTRPQGRPAGGWWRPFDVRREPGARGGRGGRRGRRRRPSRSAPGAARRCSVYS
PLSFTVYQRRSTCYELHELHELHGTPRFLEQHLHTQLFAQLDGAAGVFAAVSELGRVTAR
NWNVQREFLXTESAVAAACKHIFDLDQGFTLQRRVQPKVNVSPSKKGRLQHHNLLVCHVS
DFYTGHIQVRWFLNGQEETAGVXSTDLIHNGDWTFQILVMLEMTPQQGDIYTCQVEHPSP
DGPVTVEWSEGTSDSAWSKMLAGVGGFVLGLIALLVSFILRFRSQRVMKL
NT seq 873 nt   +upstreamnt  +downstreamnt
atgcctccacctgaggccttccccactagaccccaggggcgccccgccggcgggtggtgg
cgcccgttcgacgttcgccgagagccgggagccaggggcgggcgaggcggtaggagaggc
cgacggaggcggccgtcccgatccgcccccggggccgcgaggaggtgctcagtttactcc
ccactgagctttactgtctaccagaggcggagcacctgctacgagctccacgagctccac
gagctccacgggacgccccgcttcctagagcaacatctacacacacagctcttcgcgcaa
ttggacggcgcggcgggggtgttcgcggccgtgtccgagctgggccgagtaactgccagg
aactggaacgtccagagggagttcctgngcactgagagcgccgtggccgcagcgtgcaag
cacatcttcgacctggaccagggtttcacgctgcagcgcagagtccagcctaaagtgaac
gtctccccctccaagaagggacgcctgcagcatcacaacctgcttgtctgccacgtgtca
gatttctatacaggccacattcaagtccgctggttcttgaatggacaggaggaaacagca
ggggttntatccaccgatttgatccataatggagactggaccttccagatcctggtgatg
ttggaaatgacccctcagcagggagacatctacacctgccaagtagagcaccccagcccg
gacggtcccgtcactgtggaatggagtgagggtacatctgattctgcctggagcaagatg
ctggctggagtcggaggctttgtgctagggctcattgccctcttggtgagcttcattctc
cgttttagaagccagcgagtgatgaagttgtga

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