Vulpes lagopus (Arctic fox): 121490848
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Entry
121490848 CDS
T07435
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg00310
Lysine degradation
vlg01100
Metabolic pathways
vlg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121490848 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
121490848 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121490848 (SETDB1)
Enzymes [BR:
vlg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
121490848 (SETDB1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121490848 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121490848 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Chromo
Motif
Other DBs
NCBI-GeneID:
121490848
NCBI-ProteinID:
XP_041610901
LinkDB
All DBs
Position
5:complement(74047473..74082910)
Genome browser
AA seq
1294 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDETSRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVNMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKHGGQLRTR
PNMGAVRSKGPVVQYTQDLASTGTQFKPVEPPQPTAPPAPPIPPAPPVPPLSPQAGDNDS
LESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKPGNNQTYRSPLGSTAS
ASVAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSAQYRGK
NPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEM
FCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGV
FINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTG
VYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKIL
TDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTED
PEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEIASKDSRPPDLGPPHI
PIPPVIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGRAGGG
RGEAEKASTSGLGFKEEGDIKQAKKEDPDDRSKLSVLTESSRNYGYNPSPMKLEGLRRPP
SKTSMHQSRRLMASAQSNTDDVLTLSSSTESEGESGTSRKPTTGQTSATAVDSDDIQTIS
SGSEADDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNT
RQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRA
GTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagctacagctgcagtggagtctgaa
gagattgcagaactgcaacaagcagtggtcgaggagctgggtatctcaatggaggaactt
cggcagttcattgatgaagaactagaaaagatggactgtgtacagcagcgtaagaagcaa
ctagcagaattggaaacatgggtaatacagaaggaatctgaggtggcccatgtggaccag
ctctttgatgatgcatccagggcggtgactaactgtgagtctctggtgaaggacttttac
tccaaactgggactacaataccgggatagtagctctgaggatgaaacttcccggcctaca
gaaataatagagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactcccaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cataaaggaaccttgagtcagatgtctggagaactgagcaaagatggtgacctgatagtc
aacatgcgcatcctgggcaagaagagaactaagacatggcacaaaggcactcttattgcc
atccagacggttggaccaggaaagaagtacaaggtgaaattcgacaataaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaggatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtctgagctatatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgggacttcatagaggagtatatcacagcttac
cccaaccgccccatggtactgctcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgggtcgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctggagcccatgttcagc
atgaagacatcctcagcctctgcattggagaagaagcatgggggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggtcctgtggtccaatacacccaagatctggcc
agtactgggacccagttcaagccagtggagcccccgcagcctacagctcctcctgccccc
cccatcccacctgccccacctgtaccccctctgtccccacaggcaggtgataatgacagc
ttggaaagtcagcttgcccaatctcggaagcaggtagccaaaaagagcacatccttccga
ccgggatctgtgggctctggtcattcctcccctacctctcctgcactcagtgaaaatgtc
cctgctgggaaacctgggaacaaccagacatacagatcacctttaggctcaacagcctct
gcttcagtagcgccgccagcacctccagcacccccagctttccatggcatgctggagcgg
gccccagcagagccctcctaccgtgcccccatggagaagctcttctacttacctcatgtg
tgcagctacacatgtctgtctcgagtcaggcctatgagaagtgcgcagtaccggggcaag
aatcctctgttggtcccactactctatgacttccggcgaatgacggcccgccgccgagtt
aaccgcaagatgggctttcatgttatctataagacaccctgtggcctctgccttcggaca
atgcaggagatcgaacgctatctttttgagactggctgtgacttcctcttcctggagatg
ttctgtttggatccatatgttcttgtggaccgaaagtttcaaccctataaaccattttac
tatattttggacatcacctatgggaaggaagatgttcccctatcctgtgtcaatgaaatt
gacacaacccccccaccccaggtggcctacagtaaggaacgaatccctggcaagggtgtt
ttcattaacacaggcccagaatttctggttggttgtgactgcaaggatgggtgccgagac
aagtccaaatgtgcctgtcatcagctaactatccaggccacagcctgcaccccaggtggc
cagatcaaccctaactctggataccagtacaagagactagaagagtgtctacccacagga
gtttatgagtgtaacaaacgctgcaaatgtgacccaaacatgtgcacaaaccggttggtg
cagcatggactccaggttcgactacagctattcaagacacagaacaagggctggggaatc
cgctgcttggatgacattgccaaaggctcctttgtctgtatttatgcaggcaagatcctg
acagatgactttgcggacaaggagggcctggagatgggtgatgagtactttgccaatctg
gaccatatcgagagtgtggagaacttcaaggaaggatatgagagtgatgccccctgttct
tctgacagcagcggggtggacttgaaggatcaggaggatggcaatagtggtacagaggat
cctgaagagtctaacgatgacagctccgatgataacttctgtaaagatgaagacttcagc
accagctctgtgtggcgcagctatgctacccggcggcagacccggggtcaaaaggagaat
ggactgtctgagatagcttccaaggattcccgccccccagaccttggccccccacatatt
cctatccctccagtgatccccgtaggtggctgcaatccaccttcctctgaagagacaccc
aagaacaaggtggcctcgtggttgagctgcaatagtgtcagtgaaggtggctttgctgac
tctgatagccgttcatccttcaagactagtgaaggtggggaaggccgggctgggggaggc
agaggggaggctgagaaggcctccacttcagggctgggcttcaaggaggagggagacatc
aagcaggccaagaaagaggatcccgatgaccgaagcaagctgtcagtacttactgaaagc
tctcgaaattatggttacaatccttcccccatgaagcttgaaggactccgccgcccacct
agtaagactagtatgcatcagagccgacgactcatggcctctgctcaatccaacactgat
gatgtcctaacactgtccagcagcacagaaagtgagggggaaagtgggaccagccggaag
cccaccactggtcagacttcagccacagcagtggatagcgatgatatccagaccatctcc
tctggctcagaagcagatgactttgaggacaagaagaacatgtctggtccaacaaagcgc
caggtggcagtaaaatcaacccgagggtttgctcttaagtcaacccatgggattgccatt
aaatcaaccaacatggcatctgtggaaaagggggagagtgcacctgttcgtaagaacaca
cgccagttctatgatggggaggagtcttgctatatcattgatgccaagctcgaaggcaac
ctgggccgctacctcaatcacagctgcagccccaacctgtttgtccagaatgtcttcgtg
gacactcatgatcttcgctttccctgggtggcgttctttgccagcaagaggatccgggct
gggacagagctcacttgggactacaactacgaggtgggcagcgtggaaggcaaggagctg
ctctgctgctgtggggccatcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
