Vulpes lagopus (Arctic fox): 121494210
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Entry
121494210 CDS
T07435
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg00310
Lysine degradation
vlg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121494210 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121494210 (PRDM6)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121494210 (PRDM6)
Enzymes [BR:
vlg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
121494210 (PRDM6)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121494210 (PRDM6)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121494210 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
SET
zf-C2H2_4
Zap1_zf1
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
121494210
NCBI-ProteinID:
XP_041616345
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All DBs
Position
7:complement(119261932..119363495)
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AA seq
597 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGSGGPLKGGGAAGPLGAPQPLQPPPPPPPE
RAEPPPDPLRPRPASLSSASSTPASSSTSASSVSSCAAAAAALAGLSALPVAQLPVFAPL
AAAAVAAEPLPAKDLCLGAASGPGPAKCGGSGGDVRGGPRFRCSAEELDYYLYGQQRMEI
IPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEWLRDLP
REVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQD
GTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYN
DSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFSKSNKLSPAAQQRSVVFPQTP
CSRNFSLLDKSGPMESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQR
ILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLN
NHIRTHTGEKPFNDQSCSRTGLSGEITFPLPIDRSLCSASDGLCPIPGIQALEGATN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaccccggcggctcggccttcctcaaagtggacccagcctatctg
cagcactggcagcaactcttcccgcacggcggcagcggcggcccgctcaagggcggcggc
gccgcgggtcccctgggcgcgccgcagcctctccagccgccgccgccgccgcccccggag
cgcgccgagcctcctccggaccccttgcgcccgcggcccgcctcgctctcctccgcctcc
tccactccggcgtcctcctccacctcggcctcctctgtctcctcctgcgccgccgccgcc
gccgcgctggcgggtctgtcggccctgcccgtggcgcagctgccggtgttcgcgcctctg
gccgccgccgccgtggccgccgagccgctgcccgccaaggacctgtgcctgggcgccgcc
tcgggcccggggcccgccaagtgcggcggcagcggcggagacgtgcggggcggcccgcgc
ttccgctgcagcgcggaggagctggactattacctgtacggccagcagcgcatggagatc
atcccgctcaaccagcacaccagcgaccccaacaaccgttgcgacatgtgcgcggacaac
cgcaacggcgagtgccccatgcacgggccgctgcactcgctgcgtcggcttgtgggcacc
agcagcgccgcggccgccgcgcccccgcccgagctgcccgagtggctccgggacctgccg
cgggaggtgtgcttgtgcaccagcaccgtgcccggcctggcctacggcatttgtgcggca
cagaggatccagcagggcacctggatcgggcccttccagggcgtcctcctgcccccggag
aaggtgcaggccggcgccgtgaggaacacgcagcatctctgggagatatatgaccaagat
gggacactacagcactttattgatggtggggaacctagtaagtcgagctggatgaggtat
atccgatgtgcaaggcactgtggagaacagaatctaacagtagttcagtacaggtcgaat
atattctaccgagcctgtatagatatccccaggggtaccgagcttctggtgtggtacaat
gacagctatacgtctttctttgggatccccttacaatgcattgcccaggatgaaaactta
aatgtcccgtcaacggtcatggaagccatgtgcagacaggatgccctgcagcctttcagc
aagagcaacaagctgtccccagcagcccagcagcgctctgtggttttcccgcagaccccc
tgcagcaggaacttctctctcctggataagtcggggcctatggaatcgggatttaaccag
atcaacgtgaaaaaccagcgagtccttgcgagcccgacttccacaagccagctccactcg
gagttcagtgactggcatctctggaaatgcgggcagtgctttaagactttcacgcagcgg
atcctcttacagatgcatgtgtgcacccagaaccccgacagaccttatcagtgcggtcac
tgctcccagtcgttttcacaaccatctgagctgcggaaccacgtggtcactcactccagt
gatcggcctttcaagtgtggctactgtggtcgcgccttcgccggggccaccaccctcaac
aaccacatccgaacccacactggagaaaaacccttcaatgatcagagctgcagcaggaca
ggactctctggagaaatcaccttccccctgcctattgacagatccctctgttccgcatca
gacgggctttgtcccattccaggcatccaggccttggaaggagccaccaattaa
DBGET
integrated database retrieval system
