Vulpes lagopus (Arctic fox): 121495433
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Entry
121495433 CDS
T07435
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04140
Autophagy - animal
vlg05014
Amyotrophic lateral sclerosis
vlg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121495433 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121495433 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
121495433 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121495433 (C9orf72)
Membrane trafficking [BR:
vlg04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
121495433 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
121495433
NCBI-ProteinID:
XP_041618824
LinkDB
All DBs
Position
7:87061754..87085443
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AA seq
481 aa
AA seq
DB search
MSNLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQLLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIICTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctctgtccaccaccatctccagctgttgccaagacagagattgctctaagt
ggtgaatcacctttattagcagctacctttgcttactgggacaatattcttggtccaaga
gtaagacacatttgggctccaaagacagaacagctacttctcagcgatggagaaataact
tttcttgccaaccacaccttaaatggagaaatcctccgaaatgcagagagtggggctatt
gatgtgaagttttttgtcttgtctgaaaaaggagtaattattgtttcattaatctttgat
ggaaactggaatggagataggagcacgtatggtttatcaattatacttccacagacagaa
cttagcttctaccttccacttcacagagtgtgtgttgatagattaacacatattatcagg
aaaggaaggatatggatgcacaaggaaaggcaagaaaatgtgcagaaaatagtcttagaa
ggcacagaaagaatggaagatcagggtcagagtattattccaatgcttactggtgaagta
attcctgtaatggaactcctttcatctatgaaatcacacagcgttcctgaagaaatagat
atagcagatacagttctcaatgatgatgatattggtgacagctgtcatgaaggctttctt
ctcaatgccatcagctcacacttgcaaacttgtggctgttctgtcgtagtaggcagcagt
gcagagaaagtaaataagatagtgagaacattatgcctttttctgactccagcagagaga
aaatgttccagattatgtgaagccgaatcatcatttaaatatgagtcagggctgtttgta
caaggcctactaaaggattcaactggaagctttgtgctccccttccggcaagtcatgtat
gctccctaccccaccacacacatagatgtggacgtcaatactgtcaagcagatgccacca
tgtcacgaacatatttataatcagcgtagatacatgagatccgagctcacagcattctgg
agagccacttcagaagaagacatggctcaggatactatcatctgcacagacgaaagcttc
actccagatttgaatatttttcaagatgtcttacacagagacactctagtaaaagccttc
ctggatcaggtctttcatttgaaacctggtttatctctcaggagtactttccttgcacag
tttctactcgtccttcacagaaaagccttgaccctaataaaatatatagaagatgatacg
caaaaagggaagaagccctttaaatctctacggaacctgaagatagaccttgatttaaca
gcagagggcgaccttaacataataatggctctagctgagaaaattaaaccaggcctacac
tcatttatcttcggaagacctttctatactagtgtacaggaacgagatgttctaatgact
ttttaa
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