Vidua macroura (Pin-tailed whydah): 128804348
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Entry
128804348 CDS
T11570
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128804348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128804348
04121 Ubiquitin system [BR:
vmc04121
]
128804348
Membrane trafficking [BR:
vmc04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
128804348
Ubiquitin system [BR:
vmc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128804348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
DSE1_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF12
HHH_3
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
F-box
Beta-prop_Aladin
Beta-prop_ACSF4
TRM82_WD
Beta-prop_RIG_1st
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_VPS8
PAC11
WDR90_beta-prop_4th
PQQ_2
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
Ge1_WD40
WD40_RFWD3
Beta-prop_NWD2_C
KNTC1_N
PALB2_WD40
Beta-prop_WDR19_2nd
Vts1
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
128804348
NCBI-ProteinID:
XP_053827989
LinkDB
All DBs
Position
2:<226970..233822
Genome browser
AA seq
770 aa
AA seq
DB search
GGGAAPARCCRACAAAAPGTGTGMSGPGPAGAKLDINRAGVAELEGALSGIGRRRARGIV
RKREELKGFTCLDDLLHVKGITTRILELNSQRMTCRRCPGPEGPPQASPTPLGDSEDHRA
PAAQVVAEEEEDEEEEEAAAPGPWEPEHPWKGTPRSGADPDGSGERGPQEPPRSTREEEE
EEEEEEEEGSCCSEEGEDSSNVYLYYTLGERWIDYLQRTGDGGLLRHLRPKMKRKSENGP
DGRALSPGKKLCKGSDYGRTLGPCTPSPTTTFGDLRNAKVGQARRRRIPSVAPPPELQDW
LRTFQRWSGPEKLLALDELIDRCEPAQIKYMMQVIEPQFQRDFISLLPKELALYVLSFLE
PRDLLRAAQTCRYWRVLAEDNLLWREKCREEGIEEPLHLRKRRLLSPGFMYSPWKFAFLR
QHRIDMNWRSGELRPPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGECVQTL
VGHTGGVWSSQMRDSIVISGSTDRTLKVWNADSGECVHTLYGHTSTVRCMHLHGNRVVSG
SRDATLRLWDIETGQCLHVLMGHVAAVRCVQYDGNKVVSGAYDYTVKVWDPESESCTHTL
QGHTNRVYSLQFDGTHIVSGSLDTSIRVWDVESGNCLHTLMGHQSLTSGMELRDNILVSG
NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFSSKFVVTSSDDGTVKLWDLKTGEFV
RNLVALESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDLK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gggggcggggccgcgcctgcgcgttgctgtcgggcctgcgcggcggcagcgcccggaacc
ggtaccgggatgtcggggccgggccccgccggggccaagctcgacatcaaccgcgccggc
gtggccgagctggagggtgccctcagcggcatcggccgccgtcgtgcccgcggtatcgtc
cgcaagagagaggagctgaagggcttcacttgcttggatgacctgctgcacgtcaagggc
atcaccacacgcatcctggagctcaacagccagcgcatgacgtgccggcggtgcccgggc
cccgaggggcccccacaagccagccccactcccctgggggacagtgaggaccacagggca
cctgcggcacaggtggtggctgaagaggaggaagatgaggaggaggaggaggcggcggcg
ccagggccctgggagccggagcacccctggaagggtacccccaggtccggagcagaccct
gatggttctggggagcggggaccacaggagccccccaggtccaccagggaggaggaggag
gaagaagaggaggaggaggaagaagggagctgctgcagcgaggagggggaagacagcagc
aacgtatacctgtactacaccctgggcgagcgctggatcgactacctgcagcgcactggg
gatggggggctgctgcggcacctgcgccccaagatgaagcggaagtcagagaatggtcca
gatggccgggccttgtcccccgggaagaagctgtgcaagggctctgactatggcaggacg
ctgggtccctgtacacctagccccacgaccacctttggggacctgcgcaatgccaaggtg
gggcaggcccggcgccgtcgcatcccctcggtggctcccccacctgagctacaggactgg
ctccgcaccttccagcgctggagcggccctgagaagctgctggccctggatgagctcatt
gaccgctgcgagccggcgcagatcaagtacatgatgcaggtcatcgagccccagttccag
cgggacttcatctccctgctgcccaaggagctggccctgtacgtcttgtctttcctggag
ccacgggacctgctccgtgctgcccagacttgccgctactggagagtcctggccgaggac
aatctgctctggagggagaagtgccgtgaggaagggatcgaggagcccctacacctgcgg
aagcgacgcctgctcagccccggattcatgtacagcccctggaaattcgccttcctgcgc
cagcaccgcatcgacatgaactggcgcagtggggagctgcgaccccccaaggtactgaag
ggccacgacgaccatgtgatcacctgcctgcagttctgtggcaatcgcatagtaagcggc
tctgatgacaacacgctcaaagtgtggtcagctgtcacaggggagtgtgtgcagacactg
gtgggccacactgggggggtttggtcctcccagatgagggacagcattgtcatcagtggc
tccactgaccgcacactcaaggtgtggaacgctgacagcggcgagtgcgtgcacacgctg
tacggacacacctccaccgtgcgctgcatgcacctgcacggcaacagggtggtgagtggc
tcccgggatgccacgctgcggctctgggacattgagacggggcagtgcctgcacgtgctg
atgggccacgtggcagccgtgcgctgcgtgcagtacgacggcaacaaggtggtcagcggt
gcctacgattacacggtcaaggtgtgggaccccgagagcgagagctgcacccacacgctg
caggggcacaccaaccgtgtctactcactgcagtttgatgggacacacatcgtgagcggg
tccctggacacctcgatccgcgtgtgggatgtggagagtgggaactgcctgcacacgctc
atggggcaccagtcactcaccagtgggatggagctgcgtgacaacatcctcgtctctggc
aacgctgactccactgtcaaaatctgggacatcaagacggggcagtgcctgcagacactg
cagggtcccagcaagcaccagagtgctgtcacctgcctgcagttcagctccaagttcgtg
gtgaccagctcagatgacgggacagtgaagctgtgggacctgaagacgggggagtttgtg
cgaaacctcgtggccctggagagcgggggctcggggggcgtcgtgtggcgcatccgtgcc
tccaacacaaagctggtgtgcgccgtgggcagccgcaacggcaccgaggagaccaagctg
ctggtgctggactttgacgtggacctgaagtga
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integrated database retrieval system
