KEGG   Vidua macroura (Pin-tailed whydah): 128805449
Entry
128805449         CDS       T11570                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Pathway
vmc00900  Terpenoid backbone biosynthesis
vmc01100  Metabolic pathways
Module
vmc_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    128805449 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:vmc01006]
    128805449 (GGPS1)
Enzymes [BR:vmc01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     128805449 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     128805449 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     128805449 (GGPS1)
Prenyltransferases [BR:vmc01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   128805449 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt PhiKZ_VTX
Other DBs
NCBI-GeneID: 128805449
NCBI-ProteinID: XP_053830130
LinkDB
Position
3:45669213..45689924
AA seq 299 aa
MDGMDETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASL
LVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLE
LHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNTLG
LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENI
DIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVQQLSKMFKEPEN
NT seq 900 nt   +upstreamnt  +downstreamnt
atggatgggatggatgaaacatctaaaagaatcctagagccataccagtatttgcttcaa
ctaccaggtaagcaagtgagaaccaaactgtcacaggcctttaatcactggctgaatgtt
ccggaagataaaatacaggttatcattgaagtgacagagatgttgcacaatgcaagccta
cttgtggatgatattgaagataactcaaagctacgacggggctttccagtggcgcacagt
atctatggaattccatctgtaatcaactgtgctaattatgtttattttcttggcttagag
aaggttttaacccttgatcatccagatgctgttaaagtttttacccgtcaacttctggag
cttcataaaggtcaaggcttggatatttactggagggatacttacacctgtcctacagag
gctgagtataaagcgatggtactgcaaaagacaggcggtctctttggattagctgtaggc
ctcatgcagctgttctcgaattataaaaaagacttaaagccacttcttaacacacttggt
ctcttcttccaaataagagatgactatgccaacttgcactccaaagaatatagtgagaac
aagagtttttgtgaagatttaactgagggcaagttctcattcccaaccattcatgcaatt
tggtcaagacctgaaagtactcaggtgcaaaacattttacgtcaaaggacagagaacata
gatataaaaaaatactgtgtacattaccttgaaaatgttggttcctttgagtacactcgg
aatacattgaaagagcttgaatctgaagcctataaacaaattgaatcacttgggggaaac
cctgagcttgtagcactagttcaacagctgagcaaaatgttcaaagaacctgaaaattaa

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