KEGG   Vidua macroura (Pin-tailed whydah): 128808184
Entry
128808184         CDS       T11570                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Pathway
vmc03420  Nucleotide excision repair
vmc04110  Cell cycle
vmc04114  Oocyte meiosis
vmc04120  Ubiquitin mediated proteolysis
vmc04141  Protein processing in endoplasmic reticulum
vmc04310  Wnt signaling pathway
vmc04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128808184 (RBX1)
   04120 Ubiquitin mediated proteolysis
    128808184 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128808184 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    128808184 (RBX1)
   04350 TGF-beta signaling pathway
    128808184 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    128808184 (RBX1)
   04114 Oocyte meiosis
    128808184 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vmc04121]
    128808184 (RBX1)
   03400 DNA repair and recombination proteins [BR:vmc03400]
    128808184 (RBX1)
Enzymes [BR:vmc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     128808184 (RBX1)
Ubiquitin system [BR:vmc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   128808184 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     128808184 (RBX1)
   Cul2 complex
     128808184 (RBX1)
   Cul3 complex
     128808184 (RBX1)
   Cul4 complex
     128808184 (RBX1)
   Cul7 complex
     128808184 (RBX1)
   Cul8 complex
     128808184 (RBX1)
   Cul9 complex
     128808184 (RBX1)
DNA repair and recombination proteins [BR:vmc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      128808184 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      128808184 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-RING_11 zf-C3HC4_2 DUF8003
Other DBs
NCBI-GeneID: 128808184
NCBI-ProteinID: XP_053835017
LinkDB
Position
5:complement(19010549..19021540)
AA seq 145 aa
MPWSGLRRSFSSDAAAPTGLGYSIPRARAGEQRWSASSSPSPPAAVAQPPGLPHMLRKKL
SANWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHC
ISRWLKTRQVCPLDNREWEFQKYGH
NT seq 438 nt   +upstreamnt  +downstreamnt
atgccctggtcggggctccgccgctcgttctcctccgacgctgccgccccaacaggcctc
ggctactccatacccagagctcgggcgggcgagcagcgctggagtgcttccagctccccg
tcacccccggccgctgtggcccagccgcccgggctgcctcatatgctgcgtaaaaagctt
tctgcaaattggaacgccgtagctctgtgggcatgggacattgtggttgataactgtgcc
atttgcagaaaccacattatggatctatgcatagaatgtcaagccaaccaggcatcggct
acctctgaggaatgcacagtagcatggggcgtctgcaatcacgctttccacttccactgc
atctctcgctggctcaaaactcgccaagtatgtccgctggacaacagggaatgggagttc
caaaagtatggacactag

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