Vidua macroura (Pin-tailed whydah): 128813226
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Entry
128813226 CDS
T11570
Symbol
FBN1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04350
TGF-beta signaling pathway
vmc04518
Integrin signaling
vmc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128813226 (FBN1)
09133 Signaling molecules and interaction
04518 Integrin signaling
128813226 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128813226 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vmc00536
]
128813226 (FBN1)
Glycosaminoglycan binding proteins [BR:
vmc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128813226 (FBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_PEAR1L
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128813226
NCBI-ProteinID:
XP_053844117
LinkDB
All DBs
Position
12:complement(11637159..11782994)
Genome browser
AA seq
2864 aa
AA seq
DB search
MWRGRLLGIALGVAVLWVSQAGAAAAGHTEGVSAKESRSSRAKRRGHGGGHDALKGPNVC
GSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPNGQIAPSCGSKSIQHC
NIRCMNGGSCSDDHCLCQKGYTGTHCGQPVCENGCLNGGRCVAPNRCACTYGFTGPQCER
DYRTGPCFTLVTNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNI
RTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVTQKCDDIDECSTIPGIC
DGGECSNTVSSYFCKCPPGFYTAPDGLKCIDVRPGFCFSTLSNGRCGNQLPQPLSKMQCC
CDSGRCWASAPATAPEMCPIRSTDEYRKLCTVAAMLPARPDLPPARPDIIPPPLIPDVYP
PPHPEIIYPSRVPPVHPILPVNLTDYCQAFRHLCRNGRCIPTPGSYRCECNKGFQLHGRE
ECLDIDECERNPCVGGDCVNTQGSYICQCRVGYQSTATRTECRDIDECLQNGRICNNGRC
INTDGSFHCVCNAGFQVAADGKNCEDMDECSIRNICLNGMCINEDGSFKCICKPGFQLAS
DGRYCTDINECETDGICMNGRCVNTDGSFRCECFPGLAVGLDGRVCVDTHMRSTCYGGYK
RGQCVRPLTGAVTKSECCCASTDYAFGEPCQPCPAQNSAEYQALCSSGTGMTAGGNDINE
CLLDPDLCPNGRCENLHGTYKCYCDPGYEVDSTGKNCIDIDECALNMLLCDNGQCRNTPG
SFTCTCPKGFVYTPDLKTCEDIDECESNPCVNGVCKNTPGSFVCECSPESTLDPTRTICI
ETVKGTCWQNIVNGRCEININGATLKSQCCSSLGAAWGSPCTPCERDPICQKGYSRIRGT
LCEDVNECEVFPGVCTNGQCVNTLGSFVCQCPNGMTLDASGRTCLDIRLESCYLQHEDEQ
CTSQIPGRHRMDACCCSVGAAWGYECEECPLRGTPEFEALCPRGPGFSTKIEISGKPFSK
DINECKMFPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGQGMCV
NTPGDFKCECFEGYESGFMMMKNCMDIDECQRNPLLCRGGTCINTEGSFRCDCPPGHQIS
PNISACVDINECELSTNLCRNGRCVNLIGKYQCACNPGYQSTQDKLYCIDIDECKIMNGG
CEDFCTNSEGSYECSCKQGFALMPDHRTCTDIDECEDNPNICDGGQCTNIPGEYRCLCYD
GFMASEDMKTCIDVNECDLHPNICLSGTCENTKGSFICHCDMGYSGKKGTTGCTDINECE
IGAHNCDRHAICTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSPHADCKNTMGSY
RCLCKEGYTGDGFTCTDLDECSENLNLCENGQCLNAPGGYRCECDMGFLPSVDGKACEDI
DECSLPNICVYGTCHNLPGLFRCECEVGYELDRSGGNCTDVNECADPTTCISGTCINTAG
SYTCECPPDFELNPTRVGCVDTRSGNCYLDIKTRGDNGGTFCSNEIGVGVSKASCCCSLG
KAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFG
SFQCQCPSGYYLNEETRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDYMQVNGGNNC
MDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFSTL
CGSQRPGFFIDIYTGLPVDIDECREIPGVCENGICINMVGSFRCECPVGFFYNDKLLICE
DIDECQNGPVCQQNAECVNTAGSYRCDCKPGYRFTSTGRCTDRNECQEIPNICSHGQCID
TVGSFYCICHNGFKTNDDRTMCIDINECERDACGNGTCRNTIGSFNCRCNLGFILSHNND
CIDVDECASGNGMLCRNGQCVNTIGSFQCLCNDGYEVALDGRTCVDINECALEPGKCSPG
TCQNLDGSFRCICPPGYILQNDKCEDIDECVEQPEICALGTCSNTPGSFKCLCPEGFVLS
STGRRCQDLRVSYCFTKFEDGKCSVPKSRNHSKQECCCALKGQGWGDPCELCPEEADEAF
RQICPFGIGILVGPGDARLDVDECLDPDNCKFGQCINTDGSFRCECPYGYILQGAECVDT
DECAVGNPCGNGTCRNVIGGFECTCVEGFEPGPMMTCEDVNECIQNPLLCAFRCVNTFGS
YECKCPGGYVLREDRRMCRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDGE
GCIDENECQTKPGLCENGRCVNTVGSYRCECNEGFTVSDTQDECLDNREGYCFTEVLQSM
CQIGSSNRNAVTKSECCCDGGRGWGQNCEVCPFPGTVAFKKLCPHGRGYTSSGADIDECK
VIHDVCRNGECINERGTYHCLCNLGYTTDVTGTLCIDLDECNESPKPCNFICKNTEGSYQ
CSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNE
CATEINLCGAKGICQNTPGSFVCECQRGFSLDQTGQSCEDVDECDGNHRCQHGCQNIIGG
YRCSCPQGYLQHYQWNQCVDENECLSAHICGGASCHNTLGSYKCMCPTGFQYEQFSGGCQ
DINECGSAQAPCSYGCSNTEGGYVCGCPPGYFRIGQGHCVSGVGLGRGQGQELSLGGEVD
DNSLSPEACYECKINGYPKRGRKRRSINETASEAEDQQELEPPISLASWDIEKAAVFSIN
ISDLSNKDRILELLPALTTLTNHNRYLIDSGNEDGFFRINKKDGISYLHFTKKKPVPGNY
SLQISSIPLYKKKELNQLEAKHDKDYLSGELGDNLKMKIQILLH
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggggcggctgctggggatcgccctgggagttgccgtgctgtgggtgtcccag
gctggtgccgccgccgccgggcacaccgagggggtgagcgccaaggagagccggtccagc
cgggccaagaggagagggcacggcggcgggcacgacgcgctcaaaggaccaaatgtgtgt
ggatcacgttacaatgcctactgctgccctggatggaaaacgttacctggtggaaaccaa
tgcatagtcccaatctgcagacattcctgtggagatggattttgctctagaccaaacatg
tgcacatgcccaaatggtcagatagccccctcctgtggttcaaaatcaatccaacactgt
aacatccggtgcatgaacggaggtagctgcagtgatgaccattgcctctgtcagaaggga
tacacgggaactcactgtggacagcctgtctgtgaaaatggatgtctaaatggagggaga
tgcgtagctccaaaccgatgtgcttgcacgtatggctttactggaccccagtgtgagaga
gattacaggaccggcccttgcttcactttggtaaccaaccagatgtgccagggccagctc
agtggaattgtctgcacaaaaaccctgtgctgtgcaactgttgggagagcatggggccat
ccctgtgaaatgtgtcctgcccagccgcatccctgccgccgaggcttcattccaaacatt
cgaactggggcctgtcaagatgtggatgaatgccaagccatccctgggatctgtcaaggg
ggaaattgcattaatactgttggatcttttgagtgcaaatgcccagctggacacaagttt
aatgaagtaacacaaaaatgtgacgatattgatgaatgtagcaccattcctggaatttgt
gatggaggagagtgttcaaacacagttagcagttacttctgcaagtgtcctccagggttt
tatacagctcctgatggcttaaaatgcatagacgtgcgccctggattctgcttctccacg
ctgagcaacgggcgctgtggcaatcagctgccgcagcccctgtccaagatgcagtgctgc
tgtgacagcggccgctgctgggcgtccgctcctgccaccgctccagaaatgtgccccatc
cgatccaccgacgagtatcgtaaattgtgcacagtagctgctatgctgccagcaagacct
gaccttcctccagcccgtcctgacatcatccctccgccactcattcctgatgtttaccct
cctccacatccagaaatcatctatccatctcgggttccaccagttcatccaatcctgccg
gtgaacttaactgactattgccaagcattccgacatctctgccgaaatggacgttgtatt
cccactcctgggagctaccgctgcgagtgcaacaaaggattccaactgcatggtagagag
gaatgccttgatattgatgaatgtgaaaggaatccatgcgttggtggagactgtgtgaac
acacaaggatcctacatctgccagtgtcgtgttgggtatcagagcacggccaccagaaca
gagtgccgagacatcgatgaatgcttacagaatggtcgtatctgtaataatggacgatgc
ataaatacagatggcagttttcactgtgtgtgtaatgctggctttcaagtggcagctgat
gggaaaaactgtgaagatatggatgaatgcagcatcaggaacatttgcctcaatgggatg
tgcatcaatgaagatggcagttttaaatgcatttgtaaaccagggttccagttagcatct
gatggacgctattgcacggacatcaatgagtgtgagacagatggaatatgcatgaacggg
cgctgtgtgaacactgatggctctttcagatgtgaatgcttccctggccttgcagtagga
ctggatggacgtgtctgtgttgatacacatatgcgaagcacatgctatggtggctacaag
agaggacaatgtgtgagaccattaacgggtgcagttacaaagtcagaatgctgctgtgcc
agcactgactatgcctttggagagccttgccagccctgcccagcacaaaactcagctgaa
tatcaggctctttgtagcagtggaactggcatgactgcaggaggaaatgatattaatgag
tgcttattggatcctgatctctgtccaaatggaaggtgtgagaacctgcatggaacatac
aaatgttattgtgaccctggatatgaagtagactcaactgggaaaaactgcattgatatt
gatgaatgtgcactgaacatgctgctttgtgacaatgggcaatgcagaaatacccctgga
agtttcacctgcacctgtccaaaaggatttgtatacactcctgatctaaaaacgtgtgaa
gatattgatgaatgtgaatctaacccctgtgttaatggagtgtgcaaaaacacaccaggt
tcttttgtttgtgaatgttctcctgaaagtactttggatccaaccagaaccatctgcata
gaaactgtcaagggtacctgttggcagaacatagtcaatggaaggtgtgaaataaatatc
aatggagcaactctgaagtcccagtgctgttcctcactaggtgctgcttggggaagccca
tgtacaccatgtgaacgagacccaatatgccaaaagggatattcaagaataagaggaaca
ttgtgtgaagatgttaatgaatgtgaggtgtttcctggagtctgtacaaatgggcagtgt
gtcaataccttgggatcatttgtttgccagtgccccaatggaatgactttagatgcttct
ggacggacttgtcttgacattcgcttggagagttgctacctgcagcacgaggacgagcag
tgcacgtcccagatcccaggccggcaccgcatggacgcctgctgctgctccgtgggggca
gcctggggctacgagtgcgaggagtgtcctctcaggggaactcctgagtttgaagctctt
tgcccaaggggacctggcttctctacgaaaatagaaataagtgggaagcctttctctaaa
gacatcaatgaatgcaagatgttccctagcctttgtacccatggaaaatgcagaaatacc
attggcagttttaagtgtagatgtgacagtggatttgccctcgattctgaagagaggaac
tgcacagatatcgatgaatgccgcatctctcctgatctttgtggccaaggcatgtgtgtc
aatactcctggagacttcaagtgtgaatgttttgaaggctatgaaagtggatttatgatg
atgaaaaactgcatggatattgatgagtgtcagcgcaatccccttctctgccgaggtggc
acctgcatcaacacagagggaagttttcggtgtgattgccctccaggccatcagatatca
ccaaatatctctgcatgtgtagacattaatgaatgtgagctgagcaccaacctgtgccga
aatggccgttgtgtcaacctgattggaaagtatcagtgtgcttgcaaccctggatatcag
tccacacaagacaagctatactgtattgatattgatgagtgcaaaataatgaatggtggc
tgtgaggacttctgtacaaactcagagggcagctatgaatgtagctgtaaacaaggcttt
gcactcatgccagaccacaggacatgcactgatattgatgagtgtgaggacaatcctaac
atctgtgatggaggccagtgtacaaacatcccaggagaatacaggtgtctttgctatgat
ggattcatggcatctgaagacatgaagacttgcatagatgttaatgagtgtgatctgcat
ccaaacatctgtctgagtggaacgtgtgagaatacaaaaggctcatttatctgtcactgt
gatatgggatattcgggcaagaaaggcacaactggttgcacagatatcaatgagtgtgaa
attggagcccataactgtgacagacacgccatatgtacaaacacagctggaagcttcaaa
tgtagctgcagccctggctggattggagatggtatcaagtgcacagatctggatgagtgc
tccaatggaacccacatgtgcagcccacatgctgactgcaagaatacgatgggctcttac
cgctgcctgtgtaaagaaggttacactggggatggtttcacttgtacagacctcgatgaa
tgctcagaaaacttgaatctttgtgaaaatgggcagtgcctcaatgcccctggagggtat
cgctgtgaatgtgatatgggatttttgccaagtgtagatgggaaagcatgtgaagatatt
gatgagtgctcacttcctaacatctgtgtctacggtacttgtcataacctccctggactc
ttcagatgcgagtgtgaagtgggctacgagttggacagaagtggtggtaactgcacagat
gttaatgaatgtgcagaccctacaacctgcattagtggcacgtgtatcaacactgctggt
agttacacctgtgagtgccctcctgatttcgagctgaatcccacccgcgttggatgtgtt
gatacacgatctggcaactgttacctggacatcaaaactcggggagacaacggtggcacc
ttctgcagcaatgagattggagtgggtgtttccaaggcctcctgttgctgctccctgggc
aaagcctggggagttccctgtgagcactgcccactggtgaacacaactgaatataaggtt
ctttgccctggaggggaaggattcagaccaaaccctattacagttatattagaagatatt
gatgaatgtcaagaactgcctggactttgccaaggaggaaaatgtattaatacatttggt
agcttccaatgtcagtgtccatcagggtactacttgaatgaagagactcgagtgtgtgat
gatgtgaatgagtgtgagacacctggcatttgtgggcctggcacgtgttacaatactgtt
gggaactacacctgcatctgccctcccgattacatgcaggtcaatggaggaaacaactgc
atggatatgagaagaagtctgtgttatagaaattactatgctgacaatcaaacctgtgat
ggtgagctgctcttcaatatgaccaagaaaatgtgctgctgttcctacaacattggacgt
gcatggaataagccttgtgaacagtgtcctatcccaagcacagatgaattctccacactc
tgtggaagtcaaaggcctggcttcttcattgacatttatacaggattaccagttgatatt
gatgaatgcagagagattcctggagtgtgtgaaaatgggatctgtataaacatggttggc
agcttccgatgcgagtgtcctgtgggcttcttctacaatgacaagctcctgatctgtgaa
gatattgatgaatgccagaatggaccagtttgccagcaaaacgcagagtgtgtgaacaca
gctgggagctaccgctgcgactgcaaacctggctacaggttcacgtccacggggcgctgc
accgatcggaatgaatgccaagaaattcccaatatctgcagccatgggcagtgtattgac
actgttggaagtttctactgcatttgtcacaatggattcaaaaccaatgatgacaggaca
atgtgtatagatattaatgagtgcgagagagatgcctgtggcaacggaacctgcaggaac
accattggctccttcaactgccgctgcaacctgggcttcatcctctcacacaacaatgac
tgcatagatgtggatgagtgtgcaagtggaaatggaatgctctgcagaaatggtcagtgt
gtgaacaccattgggtccttccagtgtctttgcaatgatggctatgaggtggctctggat
ggaaggacttgtgttgatatcaatgagtgtgcactggagccgggaaaatgctcaccaggc
acatgccagaacttggatggctcattcagatgtatctgtcctcctggatacatcctgcag
aatgacaaatgtgaagacattgatgagtgtgtggaacagccagaaatttgtgccctgggc
acatgcagcaacactccaggcagtttcaaatgtctgtgtccagaaggctttgtattgtct
tccacaggaaggcgatgccaagatctgagagtgagctactgctttaccaagtttgaagat
gggaagtgttctgtgccgaagtcccgaaaccactccaaacaagagtgttgctgtgcctta
aaggggcagggatggggagatccctgtgagctctgcccagaggaagcagatgaggcattc
agacagatttgtccatttggaattggcatccttgttggacctggtgatgcaaggctggat
gtggatgagtgccttgatcctgataactgtaaatttgggcagtgtatcaacacagatggg
tctttccgctgtgaatgtccatatggttacatcctacaaggagcagaatgtgtggatact
gatgaatgtgctgttggaaacccatgtggaaatggaacttgcaggaatgtgataggaggc
tttgaatgcacctgtgtagaaggatttgagcctgggccaatgatgacctgtgaagatgtg
aacgagtgcattcagaaccctctgctctgtgctttccgctgtgtgaacacctttggatcc
tacgagtgcaagtgccccgggggctacgttctgcgggaggaccggagaatgtgcagagat
cagaatgagtgtgaagaaggaattcatgactgtgactcaaagcagatggaatgcaaaaac
ctaattggcacctatatgtgtatctgtgggcctggttatcagcgcagaccagacggggaa
ggctgtatagatgagaatgaatgtcagaccaaacctgggctctgtgagaacggccgttgt
gtgaacacagtggggagttacaggtgtgagtgcaacgagggattcacggtcagcgacacc
caggacgagtgccttgacaacagggagggctactgtttcactgaagtcttacaaagtatg
tgccaaatcggatcgagcaacaggaacgctgtcaccaagtctgagtgctgctgtgacggt
ggccgaggctgggggcagaactgtgaggtctgtcccttcccaggcaccgtggccttcaag
aagctttgccctcatggacgaggatacacatccagtggagcagatattgatgaatgcaag
gttattcatgacgtctgccgcaacggggagtgcatcaatgagaggggaacttaccattgt
ctttgcaatctgggctatactacagatgtcactggcactctttgcattgatctggatgaa
tgcaatgagtctccaaaaccttgcaatttcatctgcaaaaacacagaggggagctaccaa
tgttcatgtccaaaaggatacatcctgcaagaagatgggagaagctgcaaagatcttgat
gaatgtgcaacaaagcagcacaactgccagttcctttgtgtcaacactattggaggattc
acttgcaaatgtcctcctggattcactcagcaccatacagcctgcattgacaacaacgag
tgtgctactgagatcaatctttgtggggcaaagggcatttgccaaaatacaccaggaagt
tttgtttgtgagtgtcaacgtggcttctcacttgatcaaactgggcagagctgtgaagat
gttgatgaatgtgatggcaaccaccggtgtcagcatggctgccaaaatataattggagga
tacaggtgcagctgcccacaaggatatctccagcattaccagtggaaccaatgtgttgat
gaaaacgaatgtctcagtgcgcacatttgtggaggagcatcctgccacaatactttggga
agctataaatgtatgtgccctactggatttcagtatgagcagtttagtggaggttgccaa
gatatcaatgaatgcggttctgcacaagccccgtgcagttatggttgttcaaacactgaa
ggtggctatgtctgtggatgtccacctggttacttcagaataggacaaggacactgtgtt
tctggagtggggctaggcagaggtcaaggacaagagctttcactcggtggagaagtagat
gacaattccctctctccagaagcttgttatgaatgtaaaatcaatggctatcccaagaga
ggaaggaagcgcaggagcattaatgaaactgcaagtgaagcagaggatcagcaagagctg
gagccgccaatcagtctcgccagctgggatattgagaaagcagcggtcttctccatcaac
atctcggatctcagtaacaaagatcgcatcctggagctgctccctgccctcacaacactg
acaaaccataaccgatatttaattgactccggaaatgaagatggtttctttagaatcaat
aagaaggacggaataagttaccttcatttcacaaagaagaagccagtgcctggaaattat
tcattacaaatcagtagtattccactctataaaaagaaggaacttaaccagcttgaagca
aaacatgacaaagactacctcagtggtgagctgggagataacctgaaaatgaaaattcag
atattgcttcattaa
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integrated database retrieval system