Virgibacillus necropolis: CFK40_20650
Help
Entry
CFK40_20650 CDS
T04976
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
vne
Virgibacillus necropolis
Pathway
vne00300
Lysine biosynthesis
vne00550
Peptidoglycan biosynthesis
vne01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFK40_20650
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFK40_20650
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vne01011
]
CFK40_20650
Enzymes [BR:
vne01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CFK40_20650
Peptidoglycan biosynthesis and degradation proteins [BR:
vne01011
]
Precursor biosynthesis
Amino acid ligase
CFK40_20650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
IMPDH
Motif
Other DBs
NCBI-ProteinID:
ASN07239
UniProt:
A0A221MI03
LinkDB
All DBs
Position
complement(4327173..4328699)
Genome browser
AA seq
508 aa
AA seq
DB search
MNINFEKDNEIGILKIYGTKQNSISSITYDSRKVVEGSAFVCIAGENDDGHCFMKDAVKQ
GATVILGDNEKALRDVSQQYPDCSFLYVDNVRVAVAKLVAVFHDFRYKNLFTVGVTGTNG
KTTVAAYVRSLLNNLGLPTGSIGTTGIWTSKSKLDFMQSTPTTPEASDIHDIFDHLYACG
DKAVAMEVSSIAIEQKRVEGILFDVGIHTNLSPEHIEYHRNFENYKRAKLKLFNQVKTAV
VNVDDPEMATEILDTFKGNIFTYSLSNESNADVVATNIKVTENGSLIDLHVRGEIFKVRT
PVFGGYNVANLMAAVCVALEADFSIENIVQALSHIENPEGRFELIQDGTVGRKIILDYAH
TPVALRSLLSEVHKLEYNRLIVMIAGIGIRDFDKMPKMASVVDGEADSIVVTVDHPGYND
PSKVVDRVLDGFTNRLAENIHPTLTREDGVKKALSLGHDGDIIVLTSGCINGAQIIQGEK
VPHSDAAIIEEYFNGIQFSEGHELKEGI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaacttcgaaaaagataatgaaataggtattttgaaaatatatggtacgaaa
caaaacagtatttcatcgattacgtatgattcgcggaaagttgtcgagggatctgctttt
gtttgtattgcgggtgaaaatgatgatgggcattgtttcatgaaagatgccgtcaaacaa
ggtgcaacggttatccttggcgataatgaaaaggcgttaagagatgtcagtcagcagtat
ccagattgttcatttctatatgtcgataatgtacgagttgctgttgcaaaactagtcgca
gtttttcatgactttcgatacaagaatctatttacagtaggtgttacaggtacaaatgga
aaaacgacagtagcagcttatgttaggtcattattaaataacttaggattgccaactgga
tctataggtacgactggtatatggacctcaaaaagtaaactggatttcatgcaaagtact
ccaactactcctgaggcatcagatattcatgatattttcgatcatttatatgcatgtggt
gataaggcagttgcgatggaagtatcgtcgattgcaattgaacaaaagcgagtggagggc
attctgtttgatgtaggcatacatacaaatttgtctccagaacatatcgaataccatagg
aactttgaaaactacaaaagggcaaaactgaagttgtttaatcaagtgaaaactgcagta
gtaaatgtagacgatcctgaaatggctacggagattctcgatacatttaaagggaacatt
ttcacatatagcttgtcaaatgaatcgaatgcagatgtagtagcaacaaatataaaggta
actgaaaatggttcactaattgatttgcatgtaaggggagaaatatttaaagtgcgcacg
cccgtctttggtggctataatgtagcaaatcttatggcagctgtatgtgtagcgcttgaa
gcagacttttctatagaaaatattgtacaagccttatcacacattgaaaatcctgaggga
agatttgagctcattcaggatggtactgttggaagaaaaattattcttgattatgctcat
acccctgtagcgcttcgaagtttgctatcagaagtacacaaattagaatacaatcgccta
attgtgatgatcgctggaatagggatccgtgattttgataagatgccaaagatggcaagt
gttgtggacggtgaagctgattctattgttgtaacggttgaccatccaggatacaatgat
ccaagtaaagttgttgaccgggtccttgatggttttactaatcgactagctgaaaatatt
cacccaacattaacacgcgaagatggtgtgaaaaaagcactatctttaggtcatgacggt
gatattattgtgttaaccagtggatgtattaatggagcacaaatcatacaaggggaaaag
gtcccgcattctgatgcagcgattatagaggaatattttaatggaattcagtttagtgaa
ggtcatgaattaaaagaaggaatctaa
DBGET
integrated database retrieval system
