Vibrio nigripulchritudo: VIBNI_A0933
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Entry
VIBNI_A0933 CDS
T02871
Name
(GenBank) putative RND multidrug efflux transporter; Acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
vni
Vibrio nigripulchritudo
Pathway
vni01501
beta-Lactam resistance
vni01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VIBNI_A0933
01503 Cationic antimicrobial peptide (CAMP) resistance
VIBNI_A0933
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vni02000
]
VIBNI_A0933
01504 Antimicrobial resistance genes [BR:
vni01504
]
VIBNI_A0933
Transporters [BR:
vni02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VIBNI_A0933
Antimicrobial resistance genes [BR:
vni01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VIBNI_A0933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
CCO57091
UniProt:
U4K3E2
LinkDB
All DBs
Position
1:996625..999765
Genome browser
AA seq
1046 aa
AA seq
DB search
MWLSDVSVKRPVVAIVLSLLLCVFGFVSFTKLSVREMPDIESPVVTVSTSYDGASASIME
SQVTSVLEDQLSGISGIDEITSVSRNGFSRITIKFELGYDLNTGASDVRDAVARAQRRLP
DEANDPIVYKDNGSGEASVYINLSSSEMDRTQLTDYTERVLVDRFSLITGVSSVNISGGL
YKVMYVKLKPELMAGRGVTTTDITSALRSENVENPGGEVRNDTMVMSVRTARLYNTPEDF
DYLVVKQAKDGTPIYLRDVADVFIGAKNENSTFKSDGVVNVSLGIVPQSDANPLQVAKAV
HDEVEKIQKFLPEGTRLAIDYDSTVFIDRSISEVYNTLFITGGLVVLVLYIFIGQVRATL
IPAVTVPVSLISSFIAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIYHHIERGESP
LLAAYKGTREVGFAVVATTLVLVMVFLPISFMEGMVGLLFTEFSVLLSMSVIFSSLIALT
LTPVLGSKILKANVKASRFNTFIDNMFGKLERAYRRALSKAMAWRVLAPIIIMGCIGGSV
YLMEQVPSQLAPKEDRGVLFAFVRGADGTSYNRMNANIDIVEQRLLPLLGQGVLKSFSVQ
SPAFGGRAGDQTGFVIMILEDWEDRTQTAQQALGMVRKALGDIPDARVFPMMPGFRGGSS
EPVQFVLGGSDYQELQKWANLIKDKANESDLMNGADINYSEKTPELVVSVDKQRAAELGI
RITDISTTLEVMLGGKTETTFIERGEEYDVYLRGDENHFNSAADLSQIYMRTQTGQLVTL
DAVTKIEEVGASIRLSHTNKQKSITVSANLNEGVTLGQALDHLDKLAIDNLPSDISVAYS
GESKEFKENQASVLIVFALALLVAYLVLAAQFESFVNPLVVMFTVPMGVLGGFLGLFFMD
QGLNIYSQIGMVMLIGMVTKNGILIVEFANQLRDKGIEFEQAIVDAAARRLRPILMTAFT
TLSGSIPLILSSGAGYESRVAVGTVIFFGMAFATMVTLFVIPAMYRLISARTHSPGYVES
QLNAALAKDVKARSSHGEITMGSSKE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgtctgatgtatcggtaaaaagaccggttgttgccattgttttgagcttactg
ctctgtgtgtttggttttgtttctttcaccaagctttctgttcgggaaatgccggacata
gaaagccctgtggttaccgtcagtaccagttatgacggggcatcggcttccatcatggaa
agtcaggtcacttccgtattggaagaccagctctctggcatcagtggtatagacgaaatt
acgtctgtttcgcgcaatggcttttcccgaatcaccataaaattcgaacttggctacgac
ctgaacactggcgcgagcgacgtgcgtgatgcggtcgcccgagcccagcgccgtttgccc
gatgaagccaatgatcccatcgtctacaaagataatggcagtggcgaagcttcggtatat
atcaacctaagttcttccgaaatggatcgcacccagctaacggattataccgagcgtgtg
ctggtcgaccgcttttctcttatcactggagtcagctccgtcaacatttcgggcggattg
tataaggtgatgtacgttaagctaaagccagagcttatggcggggcgaggtgtaaccaca
accgacattaccagtgcacttagaagcgaaaacgttgaaaacccagggggagaagtccga
aacgacactatggtcatgtcggttcgcaccgcccgtttatacaacacacctgaagatttt
gattacctggtcgtcaagcaagctaaagacggcacaccaatatatcttcgcgatgttgcg
gatgtgtttatcggtgcgaaaaacgaaaactccactttcaaaagtgacggcgtagtaaac
gtcagtttaggcattgtccctcagtctgatgccaacccattgcaagttgccaaagcggta
catgatgaagttgagaagattcagaaattcttgccagaagggacgcgtttagcgatcgac
tacgactctaccgtattcatcgaccgctcgatttctgaagtctataacactctctttatc
acaggtggcttggtggtattggtgttgtacatctttatcggacaagtcagagcaacgctg
atccctgcggtaacggtgccagtttctctgatttcttcttttatcgcagcttattatttc
gggttttctatcaaccttatcaccctaatggctctgatactttccatcggattggtggtg
gatgatgccatcgttgtggttgaaaacatttatcaccatatcgaacgcggtgaatctccc
ttactggctgcttataaaggcacacgcgaagtgggtttcgctgtagtggcgacaacctta
gtgctggtgatggtgttcctgcccatttcctttatggagggaatggtcggtcttttgttt
actgagttttctgttttgctctccatgtcagtgattttctcctccctgatagcgctgact
cttacgccagtactgggaagtaagatcctcaaggcgaatgtgaaagccagccggttcaat
accttcatcgacaatatgtttggcaaacttgagagagcgtatcgccgagcgctatccaaa
gccatggcgtggcgagttcttgctccaatcatcattatgggttgtatcggtggcagtgtt
tatctgatggaacaggtgccttctcaactggcaccaaaagaagaccgtggtgtgttgttt
gcgttcgtaagaggagcagatggcaccagttataaccgaatgaatgccaatatcgacatc
gtagagcaaaggttattgccgcttctagggcagggtgtactgaagtctttcagtgttcag
tctccagcgtttggaggtcgggctggtgaccagactggcttcgttattatgatattggaa
gactgggaggacagaactcaaactgcccagcaagccctaggaatggtgagaaaagctttg
ggtgatattccagacgccagagtctttccaatgatgccaggttttcgtggaggctctagc
gaacccgttcagtttgtactcggtggctctgactatcaggagctacagaaatgggcaaat
ctcatcaaagacaaagccaacgaaagcgatttgatgaacggggcagacatcaactactcc
gaaaagacgccggaacttgtggtgagtgttgataagcaacgtgcggcagaattggggatt
agaatcaccgacatttctaccacactggaagtgatgcttggcggtaaaacagaaaccaca
ttcatcgagcgaggtgaagaatatgatgtctatcttcgtggcgatgaaaaccacttcaac
agcgcagccgatctcagccaaatatacatgcggacccaaactgggcaactcgttactctg
gatgcagtaaccaaaattgaagaagtaggcgcatcgattcgtctttctcacactaacaaa
caaaagtcgattaccgtcagtgctaatctcaatgaaggggtcacactagggcaggctctg
gatcacttagataaactggcgattgataatctgccgagtgacatcagcgtcgcttactct
ggtgaatccaaggaattcaaagaaaaccaagccagtgtgcttatagtgtttgcgttagcc
ctgttagttgcctaccttgttttagccgctcagtttgaaagctttgtaaaccctctggtt
gtcatgtttaccgttcctatgggcgtattaggtggatttctggggctattctttatggat
cagggcctcaatatatacagccagataggtatggtcatgctaattgggatggtgacaaaa
aacggcattttgatcgtagaatttgccaaccaactgcgggacaaaggtatcgaatttgag
caagcgatcgtcgatgcggcagccagacgtttacgcccgatccttatgacggcgtttacc
acactttcaggttcaataccgctgatattgtcgagcggtgccggttacgaaagccgcgtg
gctgtgggtactgtcatcttctttggaatggcattcgctaccatggtgaccctgtttgtg
attccggcgatgtatcgactgatctctgctcgcacgcattcgcctggctatgtagaatca
cagctcaatgccgcgttagcgaaagacgtaaaagcccgttcatcacatggtgagattaca
atgggcagcagcaaagaatag
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integrated database retrieval system
