Vibrio neocaledonicus: D3H41_02170
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Entry
D3H41_02170 CDS
T06228
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00540
Lipopolysaccharide biosynthesis
vnl01100
Metabolic pathways
Module
vnl_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
D3H41_02170
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vnl01005
]
D3H41_02170
Enzymes [BR:
vnl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
D3H41_02170
Lipopolysaccharide biosynthesis proteins [BR:
vnl01005
]
Lipid A
D3H41_02170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QCO84981
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Position
1:439559..440476
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AA seq
305 aa
AA seq
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MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDVNPPVDFPADPASVRDT
MLCTALVNDEGVRISTVEHLNAALAGMGIDNIVVEVDAPEIPIMDGSASPFVYLLQQAGI
ETQNAPKRFIRIKKPVRFEDGDKWAEFVPFNGFRMDFEIEFNHPAIESDEQRLLFDFSSK
GFVREISRARTFGFMRDIEYLQSQNLVLGGSFDNAIVLDDYRILNEEGLRFENEFVTHKV
LDAIGDLYMCGHPIIGEFRAFKSGHGLNNQLLRAVLADQEAWEWTTFEEEVGSPVAFAEP
NMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaagaaatagtgaaaacaactggtgtgggtctccactct
ggtcgtaaagtcacacttactctgcgcccggctgctgcaaatacaggtatcatttaccgt
cgtacagatgtaaatccacctgtagattttccagctgatccagcttcggttcgtgacacc
atgctttgtactgcattggtaaacgatgaaggtgtgcgtatttcaactgttgagcacttg
aatgcggcacttgctggtatgggcatcgataacattgttgtcgaagtagacgcacctgaa
attccgatcatggatggtagtgcaagcccatttgtatacttgctacaacaagcaggtatc
gaaacgcaaaatgcgccaaaacgcttcatccgcatcaaaaagccagttcgttttgaagat
ggtgataaatgggcagaatttgtaccatttaacggcttccgtatggacttcgaaattgag
tttaatcacccagcgattgaatcagacgagcaacgtttgctgtttgatttctcgtcaaaa
ggctttgttcgtgagatttctcgagcacgtacgtttggctttatgcgtgatatcgaatat
ctacaatctcaaaacctagttttgggtggtagttttgacaatgctatcgttttggatgat
taccgtattcttaatgaagaaggtctacgctttgaaaatgagtttgtgactcacaaagtg
ttggatgcgattggtgacctttacatgtgtggccacccaatcattggtgaattccgtgcc
tttaaatctggccacggtttaaataaccaactgttacgtgctgttcttgcagatcaggaa
gcgtgggagtggactacattcgaagaagaagtcggctcaccagtagcattcgcagaacca
aatatggtgcttgcgtaa
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