Vibrio neocaledonicus: D3H41_04820
Help
Entry
D3H41_04820 CDS
T06228
Symbol
vmeF
Name
(GenBank) multidrug efflux RND transporter permease subunit VmeF
KO
K18138
multidrug efflux pump
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01501
beta-Lactam resistance
vnl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3H41_04820 (vmeF)
01503 Cationic antimicrobial peptide (CAMP) resistance
D3H41_04820 (vmeF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_04820 (vmeF)
01504 Antimicrobial resistance genes [BR:
vnl01504
]
D3H41_04820 (vmeF)
Transporters [BR:
vnl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D3H41_04820 (vmeF)
Antimicrobial resistance genes [BR:
vnl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3H41_04820 (vmeF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF5077
Motif
Other DBs
NCBI-ProteinID:
QCO85445
LinkDB
All DBs
Position
1:977776..980889
Genome browser
AA seq
1037 aa
AA seq
DB search
MLLSDVSVKRPVAALVLSMLLCVFGFVSFTKLAVREMPDIESPVVSISTRYEGASATIIE
SQITSVLEDQLSGISGVDEISSTTRNSMSRITITFELGYDLNTGVSDVRDAVARAQRSLP
DEADDPIVYKNNGSGEASLYINLSSAEMDRTQLTDYAERVLMDRFSLISGVSSIDLSGGL
YKVMYVKLKPELMAGRSVTASDITSALRSENLESPGGEVRNDSTVMSVRTARTYNTPEDF
QYLVIKRASDNTPIYLKDVADVFIGAENENSTFKSDGVVNISLGVVPQSDANPLEVAKLV
RSEVDNIQKFLPEGTRLAIDYDATVFIERSIEEVYSTLFITGGLVILVLYIFIGQARATL
IPAVTVPVSLISSFIAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGESP
LLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMSVIFSSLIALT
LTPVLGSQILKANVKPNRFNEAVDRLFSKLESGYRALLKGALKVRWAAPLVILACLGGSY
FLMNQVPAQLTPQEDRGVIFAFVRGADATSYNRMSANMDIVEDRLMPLLGQGYLKSFSIQ
TPAFGGQAGDQTGFVIMILEDWNERDITAQQALNKVRKELAGIPDVRVFPFMPGFQGGSS
EPVQFVLGGSDYDELVVWAEMLKNKAEESPMMEGAEIDYSEKTPELLVTVDRQRAAELGV
SVQDISDTLEIMLGGKSETTYVERGEEYDVYLRGDENSFNNAADLSQIYLRTNSGQLVTL
DAVTKIEEVAASIRLSHYNKQKSITITANLSEGYTLGDALNYLDQEAIDNLPGDISVSYS
GESKDFKENQASVAVVFALALLVAYLVLAAQFESFVNPLVVMFTVPMGVFGGFLGLVIMG
QGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVGFEKAIIDAAARRLRPILMTAFT
TLAGAIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLFVIPAMYRLISAKTQAPGHVEA
ELNKAISHDTKGRVAHP
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgttactgtccgacgtttcagttaaacgccctgtcgcggcgttggttctgagcatgctg
ttgtgtgtgtttggctttgtgtcattcaccaaattagccgttcgtgaaatgcctgatata
gaaagcccagtcgtttctatcagtacgcgttatgagggtgcatcggcgactattattgaa
agccaaattacctccgttttggaagaccagctttctgggatcagtggagttgatgaaatt
agctccactactcgtaacagcatgtcgcgtatcacgatcacgtttgaattaggttacgat
ctcaacacaggtgtgagcgacgtgcgtgatgctgtggctcgtgctcagcgctcgctacct
gatgaagcggatgaccctattgtttataagaacaatggctcgggagaggcgtcgctctat
atcaatctcagttctgcagagatggaccgtactcaattaaccgattatgccgaacgtgta
ttgatggaccgctttagcctgatctctggggttagctccattgatctctccggtggtttg
tacaaggtaatgtacgtgaagcttaagccagaactaatggctggacgttcagttacagct
tcggacattacatcagctttgcgaagtgagaacctagaaagcccaggtggtgaagttcgc
aacgactcaacggtaatgtccgtgcgtacggctcgtacttataacacgcctgaagatttt
caatatcttgtcattaaacgcgcaagcgacaatacacctatctatttaaaagatgtagca
gatgtcttcattggtgcagaaaacgaaaactcaaccttcaaaagtgatggtgtagtaaac
atcagtcttggtgtggtaccgcagtcagacgcaaacccgttagaggttgcgaagctggtt
aggtctgaagtcgataacatccagaagttcttaccagaaggtacacgtcttgcgatagat
tacgacgcgacagtatttatcgagcgttcaatcgaagaggtgtacagcacgctatttatc
acgggcggcttggtgattttggtgttgtacattttcatcggccaagctcgtgcaacctta
attcctgcggttacggtacctgtttctctgatttcttcgttcattgccgcgtactacttt
gggttttctatcaacttgatcaccttgatggcgttgatattatcgattggtttggtggtg
gatgacgcaattgtggttgtagagaatatcttccaccatattgaacgcggtgaatcgcca
ttactcgccgcatataaaggcacaagagaggttggttttgctgttatagcaacaacatta
gtgctggtgatggtgttcttaccgatctcctttatggatggcatggtaggtctactattt
acagagttttctgtattgctggctatgtcggtcatattctcctctttgattgccctgacg
ctgactcctgtattagggagtcagattttgaaagcgaatgtaaaaccaaatcgattcaat
gaagcggttgatcgcttgtttagcaagcttgagagtggctatcgcgcattattgaaaggc
gcattgaaagtacgttgggctgctccgctggtgattctagcttgtttgggcggtagctat
ttcttgatgaatcaggtaccggcccaactgaccccacaagaagatcgcggtgtgatattc
gcgtttgtgcgcggtgcagatgctacgtcatacaatcgtatgtcagccaatatggatatt
gtcgaagaccgattgatgccattactagggcaaggttatctgaagtcattcagcatccaa
acgccagcgtttggtggccaggcaggagaccagacaggctttgtgatcatgattctagaa
gattggaacgaacgtgatatcacggctcagcaagcccttaacaaagtacgtaaagaattg
gcaggtatcccagatgttcgagtgttcccatttatgccaggtttccaaggtggttcgagt
gagccagttcagttcgtattaggcggctctgattacgatgagctcgttgtttgggctgaa
atgctaaagaacaaagcagaagaatcaccaatgatggaaggagcagagatagattactcg
gaaaaaacgcctgagttattggttacagttgaccgacagcgtgccgcagagctaggagtc
agtgttcaagacatttctgacaccctagaaatcatgctcggtggtaaaagcgaaacgact
tatgttgagcgtggcgaagagtacgatgtgtatcttcgcggtgatgaaaatagctttaat
aatgctgcagatttaagtcagatttatctgcgcacgaatagcggtcagctagtgacgtta
gatgcggtcacaaaaattgaagaagtggcggcctctattcgtctttctcactacaacaaa
cagaagtccatcactattactgccaacctgtcggaaggttatacattaggagatgcgctg
aattacctagaccaggaagccatcgacaacttaccgggtgacatttcggtgagttattcg
ggggagtcgaaagactttaaagagaaccaagcgagtgttgctgttgtgtttgcattggca
ctactagtggcgtatctcgtgttggcggctcagtttgaaagcttcgtaaacccgttagtg
gtcatgtttacggtgccgatgggtgtatttggtggcttccttggtttggttattatgggc
caaggtatgaacatttatagccagattggcatgatcatgttgattggtatggtgacgaaa
aacggtattttgatcgtagaatttgccaatcagctacgtgatcgtggcgttgggtttgaa
aaagcgatcattgatgcagctgcgcgacgtctacgtccaatcttgatgactgcgtttacc
acacttgctggcgcaattccgttgatcgtatcgacaggggcgggttatgagagccgtatt
gccgtgggtacggttatctttttcgggatggggtttgcgacattggtgaccttgtttgtt
atcccggcaatgtaccgattgatttcggcgaaaacacaagcaccaggtcatgtagaagca
gagttaaacaaagcaattagccatgatacgaagggccgtgttgcccacccctag
DBGET
integrated database retrieval system
